Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01075 ATGGCCACCATCACCAAACCTTACATAGATATTGAACCTGACTACGACAGCAGCTCCTCATCCATCACCATACCTGAATCAACCCGTAGCTGGATGAGTAACCTCAGCTTTGGAAGCCGCCGCCGTCGAAGCTCCGTCTCCGTTTCTTCCACCACCACATACACCTCTTCAGTATTAGGTTCCAACGCTAAGCCTCATAAGGCAAACCAAGTTGCATGGGAGGCTATGAGTCGACTCCGGCTCGACCAAGGTCGAGTCGGACTCGACCACTTCCGCCTCCTTAAGCGGCTTGGAAGCGGGGACATAGGGAATGTTTATCTTTGTCAGATAAGGAATCCTGTAGTTGGTTTGCCTCAGTGTTTTTATGCTATGAAAGTTGTTGATAGAGAAGCACTTGCTATAAGGAAGAAGTTGCAAAGAGCAGAGATGGAGAAGGAGATTTTGGGGATGCTTGATCATCCTTTTTTACCTACTTTGTATACTGATTTTGATGCTTCTCATTACTCTTGTTTGGTTATGGAGTTTTGTCCTGGTGGTGATTTGTATGCTTGTCGCCAACGCCAGCCTGGGAAGCGCTTTTCATTATCATCCTCTAAGTTTTATGCAGCTGAAACACTATTGGCACTAGAGTATCTACACATGATGGGAATAGTATACAGAGATTTAAAGCCAGAGAATGTTTTAGTAAGAGAAGATGGACACATAATGCTCTCAGATTTTGATCTTTCACTCAAATGTGACGTTGTTCCAAAGCTCTTAAGAAGCAAAACAAGATTAGAACGAAGTATCAAAACTACTACAATGAGATGTTCAACACCTTCTTGCATTTCTCCCATGCAACCAGTTCTGTCATGTTTCTTATCATCATCAACAAAGAAAAAGAAAACAAAACTTGAAACAGTTATTAGAGAAAATGTTCAAGAAGAGTTTCAGGTTGATCTTGATCCTGATTTTGTAGCTGAACCAATTGAAGCAAGATCAAAATCATTTGTGGGGACACATGAATATTTAGCACCAGAAGTTATATTAGGACAAGGTCATGGAAGTGCAGTGGATTGGTGGACATTTGGTGTTTTTTTGTATGAAATGTTATATGGAAGAACACCATTTAAAGGTGAGAACAATGAGAAAACATTGGTCAACATTCTTAAGCAACCTTTGACTTTTCCTAGGATTGGTGTTAGTAGTAATTATGAGTTTGAAGAGATGGTGAAAGTTCAAGATCTTATTAGCAAATTGTTGGTGAAGAATCCAAATAAGAGAATTGGAAGTTGTTTGGGTTCTGTTGAGATTAAAAGACATGAGTTTTTTAAGGGTGTTAATTGGGCTTTGATTAGATCAGTTAGACCCCCTGAGGTTCCTAGTGATAAGAATAAGATTAGGAATAGAGTTTTGATGCCTAAATTAAGCAAGAAAGATAGAGATCAACCATTTCAGCTTAAACATCAATTTGATTACTTCTAA 1464 0.3941 MATITKPYIDIEPDYDSSSSSITIPESTRSWMSNLSFGSRRRRSSVSVSSTTTYTSSVLGSNAKPHKANQVAWEAMSRLRLDQGRVGLDHFRLLKRLGSGDIGNVYLCQIRNPVVGLPQCFYAMKVVDREALAIRKKLQRAEMEKEILGMLDHPFLPTLYTDFDASHYSCLVMEFCPGGDLYACRQRQPGKRFSLSSSKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKTRLERSIKTTTMRCSTPSCISPMQPVLSCFLSSSTKKKKTKLETVIRENVQEEFQVDLDPDFVAEPIEARSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLVNILKQPLTFPRIGVSSNYEFEEMVKVQDLISKLLVKNPNKRIGSCLGSVEIKRHEFFKGVNWALIRSVRPPEVPSDKNKIRNRVLMPKLSKKDRDQPFQLKHQFDYF 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01075 487 Gene3D Transferase(Phosphotransferase) domain 1 325 455 - -
Mepo1g01075 487 CDD STKc_phototropin_like 89 454 - -
Mepo1g01075 487 FunFam protein kinase PINOID 2 89 175 - -
Mepo1g01075 487 Gene3D Phosphorylase Kinase; domain 1 89 175 - -
Mepo1g01075 487 Coils Coil 124 144 - -
Mepo1g01075 487 FunFam protein kinase PINOID 176 244 - -
Mepo1g01075 487 Pfam Protein kinase domain 92 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01075 487 Pfam Protein kinase domain 327 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01075 487 FunFam serine/threonine-protein kinase D6PK-like 325 455 - -
Mepo1g01075 487 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Mepo1g01075 487 ProSiteProfiles Protein kinase domain profile. 91 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01075 487 Gene3D Transferase(Phosphotransferase) domain 1 176 278 - -
Mepo1g01075 487 SUPERFAMILY Protein kinase-like (PK-like) 73 455 IPR011009 -
Mepo1g01075 487 SMART serkin_6 91 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01075 487 PANTHER FLIPPASE KINASE 1-RELATED 41 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01075 Mepo-Chr1 10332102 10334620 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01075 1 487 AGC Kinase Gene Family AT2G26700 59.701 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mepo1g01075 Pkinase 9.7e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01075 K08286 - gmx:100777988 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01075 1 10332102 10334620 Mepo1g01075 1 10332102 10334620 ECH