Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01041 ATGGCTTACAACCCTGTCCTGTTGTTACTGTTCTTTTTCTTCATGCTATTTACTTGTTCATGCCTTGACTTACCACAAACGTGTACTGGGAGAACGGGTACTGGGAAGCGTAATGCAGAAGCAACAACTGAAAAACACCCCAGAATCATTGGGTTGGGTTCTTTGCTCCATCCTAAAGGCAAAAATACTTCATGGCCATCACGTTCTGGCCATTTTGCTTTTGGGTTTTACCCCAAAGATAGTGGTTTTGCTGTTGGAATATGGTTGGTTAATCCATCTGAAAACACAACCACTGTTGTGTGGACTGCTAACCGTGATGCTCTAGCAGTCTCCCCTAAACCTATGTTGAATTTGACAGAGCAAGGTCTGCTTCTTCAAAATGGAAACAGAGATTCAGCTATGAATATAAACTTGAGAGATGATTCAGAGGAGAATTTGGTCTCTAAGGCATCTATGCATGATTCTGGCAACTTTGTGCTTTATGATGAGAATTCTAAAGTTATATGGCAAAGCTTTGATTACCCAACAGACACCATATTAGGAGGTCAGAATTTGACTGCTGATGATTATTTAATCTCTAGTATGTCCAAATCAGATCATTCTAGTGGACGTTTCTATCTTGGGATGCAAGGTGGTGGTAGCGTTGCTGCTTACCCTTTTTACAGCTTCAGAAGTGATGAGGATGCTTACTGGGATTCATACACTTCGCATCAGATGTACGGACAACTGCTCAGTCTTGACATTAAAGGCTTTCTTTGTGTAAAGGCTGCAGTTACAACTTGTCATCCTCAAGGATATTACGGTTCTAGTTCTTGTATATCTTCTGCTCAAGCTTATCATCGTTCTAGTTCTTGTATATCTTCTTCTCAAGATTATCATAGTCAATGTTTCAACTATACCAATAAGCCTAGAAAGAAGTCAAACAACGCAACTTCAATCTACCGTGCAACACTTGACGTAGATGGAAACTTGAGATTGTATGAACACCAATTTCATTTTGAAGGCAACAATAGCTCTCGTGTGGTAATGTTGTGGAAAGCACTTAATGAGACATGTTTAGTGAAGGGGTTTTGTGGGTTGAACAGTTATTGCACTTCCAACATCAGCGGTGATGCTGTCTGCAAGTGTTATCCTGGTTTTGTCCTTTCCGAGACCAAAAGTAATCCTAAATTGCCTATGGACTGTGTACAGAAACATAGCAAAGATGACTGTGAAAGCAGAGAAGGCACGGCGTTATATAATTATACTAACTTTAGGAATATGTCTTGGGGTGATATTCCATATTCTGTTATACCTGTTATGAACACGAAAACTTGTGAGCAGGCTTGCCAAGAAGATTGTGTTTGCGGGGGAGCAATATATACAAACGCTAGCTGCAATAAATACAGGCTTCCACTTATTTATGGCAGGGTTCAAAATGATTCTTCCACCGTGTCTGTGGCCCTATTAAAGATTCGTTCTTCAACAACTGCCATTATTTCACCTCCAACCTCAAACAACACCAATGTGCCTAAGCCCGAGGTTGTTGTTGACAGCAAGAGGAATCTGATAATGATCCTATCTCTTACTTTGGGCGTCGTTGCATTAATTTGTTTGGTCTTTGCAGTGTCCATTTTCTTCACTTATAGACGTCAAGTTAATAGGTACGCAATGTTGTCAGAAAGTGAAAAACTTGAATTTACTGAAGAATGTTCCCTGCGTTCATTTTCTTTTGACGAACTTGCAAAAACAACTGGGGGATTTTCAGAAGAGATAGGGAGAGGATCATTTGGAGTTGTTTATAAAGGTAAATTGGGCAACAATAACAAAAGTATTGCTGTGAAGAGACTGGAGGAGAGAATTACTGATGCAGGGGAGAGGGAGTTCCAAGCTGAAATTACTGCCATTGCTCGAACTCATCATAGGAATTTGGTTAAGCTAATTGGTTTTTGTATAGAAGGATCCAAGAAGCTCCTCGTTTATGAATTTGTCAGCAAAGGATCTCTTGCAAATCTCCTCTTTGAAGGGGAAAAGAGACTATCTTGGAAAGAGAAAATGAAACTTGCATTGGATGTGGCTAGAGGTCTTTTGTATCTACACGAAGAGTGTGATGTCCGAATCATCCATTGCAATATAAATCCTCGAAAAATACTTATAGACGAAGCATGGACCGCAAAAATATCTGATTTTGGATTTGCAAGGTTATCAAAGAGGGGCCATTCAAGAACCAAAATAGGGGATGGTACAAGCAGGTACTTGGCACCCGAATGGCAGAAGGAGGATGCATCAGTATCAGTAAAAGCTGACGTTTACAGTTTTGGGGTGGTACTATTGGAGATTATTTGCCGCAAAAGAAGTATAGAGATGAATAATATTTCCTCGGCCGATGAAATCCCTCTTTCCACCTGGGTATATCAATGTTTTGCATCAGGACAATTGAACAAGCTAATCACACATAATGAAAATGATATGGATTGGAAGATACTGGAAAGAATGGTGAAGGTGGGGTTGTGGTGTGTGCAAGACCACCAATCTCTCCGTCCTGGAATGAAAAATGTAATCTTGATGTTAGAAGGTTTGAAAGATATTCCAGTTCCTCCCTCTGCAGCTCGCTTGCTCGAGTAG 2604 0.4036 MAYNPVLLLLFFFFMLFTCSCLDLPQTCTGRTGTGKRNAEATTEKHPRIIGLGSLLHPKGKNTSWPSRSGHFAFGFYPKDSGFAVGIWLVNPSENTTTVVWTANRDALAVSPKPMLNLTEQGLLLQNGNRDSAMNINLRDDSEENLVSKASMHDSGNFVLYDENSKVIWQSFDYPTDTILGGQNLTADDYLISSMSKSDHSSGRFYLGMQGGGSVAAYPFYSFRSDEDAYWDSYTSHQMYGQLLSLDIKGFLCVKAAVTTCHPQGYYGSSSCISSAQAYHRSSSCISSSQDYHSQCFNYTNKPRKKSNNATSIYRATLDVDGNLRLYEHQFHFEGNNSSRVVMLWKALNETCLVKGFCGLNSYCTSNISGDAVCKCYPGFVLSETKSNPKLPMDCVQKHSKDDCESREGTALYNYTNFRNMSWGDIPYSVIPVMNTKTCEQACQEDCVCGGAIYTNASCNKYRLPLIYGRVQNDSSTVSVALLKIRSSTTAIISPPTSNNTNVPKPEVVVDSKRNLIMILSLTLGVVALICLVFAVSIFFTYRRQVNRYAMLSESEKLEFTEECSLRSFSFDELAKTTGGFSEEIGRGSFGVVYKGKLGNNNKSIAVKRLEERITDAGEREFQAEITAIARTHHRNLVKLIGFCIEGSKKLLVYEFVSKGSLANLLFEGEKRLSWKEKMKLALDVARGLLYLHEECDVRIIHCNINPRKILIDEAWTAKISDFGFARLSKRGHSRTKIGDGTSRYLAPEWQKEDASVSVKADVYSFGVVLLEIICRKRSIEMNNISSADEIPLSTWVYQCFASGQLNKLITHNENDMDWKILERMVKVGLWCVQDHQSLRPGMKNVILMLEGLKDIPVPPSAARLLE 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01041 867 FunFam S-receptor-like serine/threonine-protein kinase 548 656 - -
Mepo1g01041 867 FunFam Putative receptor-like protein kinase 657 858 - -
Mepo1g01041 867 ProSiteProfiles Protein kinase domain profile. 579 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01041 867 Pfam Protein tyrosine and serine/threonine kinase 581 846 IPR001245 GO:0004672|GO:0006468
Mepo1g01041 867 SUPERFAMILY Protein kinase-like (PK-like) 562 851 IPR011009 -
Mepo1g01041 867 Gene3D Transferase(Phosphotransferase) domain 1 657 856 - -
Mepo1g01041 867 PIRSF SRK 39 866 IPR024171 GO:0004674
Mepo1g01041 867 SUPERFAMILY alpha-D-mannose-specific plant lectins 98 235 IPR036426 -
Mepo1g01041 867 Gene3D Phosphorylase Kinase; domain 1 551 656 - -
Mepo1g01041 867 Pfam D-mannose binding lectin 98 188 IPR001480 -
Mepo1g01041 867 SMART blect_4 56 175 IPR001480 -
Mepo1g01041 867 ProSiteProfiles Bulb-type lectin domain profile. 52 173 IPR001480 -
Mepo1g01041 867 Gene3D - 57 173 IPR036426 -
Mepo1g01041 867 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 56 860 - -
Mepo1g01041 867 Gene3D - 176 348 IPR036426 -
Mepo1g01041 867 ProSitePatterns Protein kinases ATP-binding region signature. 585 608 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01041 Mepo-Chr1 10046236 10049097 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01041 495 860 Receptor kinase-like Gene Family AT4G18250 38.462 1.42e-62 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mepo1g01041 PK_Tyr_Ser-Thr 2.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01041 - - cam:101496142 1242.25