Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01039 ATGGTTCAGTCAAAGAAGTTCAGAGGTGTCAGGCAACGACATTGGGGTTCTTGGGTTTCAGAGATTCGTCACCCACTTTTGAAGAGAAGGGTGTGGCTAGGAACATTTGAAACAGCAGAAGAAGCAGCAAGGGCATACGATCAAGCAGCAATTTTAATGAGTGGTAGAAATGCCAAAACAAATTTCCCAATAACACAAACTTCTGAAGGTGATCCAAAAAGCATTACAAGTAATGAGAACAAACCTTCAACTTCAAAGGATCTAGAAGAAATTTTACATGCAAAACTTCGAAAATGTAGCAAGGTACCATCTCCTTCCATGACTTGTTTAAGGCTTGACACAGAGAACTCTCACATTGGTGTGTGGCAAAAGCGTGCTGGGAAGTGTTCTGAATCAAATTGGGTTATGACTGTTCAGCTTGGGAAAAAGATGAGTGTAACCCAAGATAGTGGTAGTAGCAGTAGTAGTTTGGTACCTTCATCGGCGGTCGCAACGCAAGAGGAAATTGTGCGAGGAGAGATTGATGAAGAAGATAGAATCGCACTTCAAATGATAGAGGAACTTCTTAATGACAAGAACTGTCCTAGCCCATCAATTAATAATATTAAGCAAGGGGATGATATTGATAACAGCTTTTTTCTTTAA 645 0.4031 MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKTNFPITQTSEGDPKSITSNENKPSTSKDLEEILHAKLRKCSKVPSPSMTCLRLDTENSHIGVWQKRAGKCSESNWVMTVQLGKKMSVTQDSGSSSSSLVPSSAVATQEEIVRGEIDEEDRIALQMIEELLNDKNCPSPSINNIKQGDDIDNSFFL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01039 214 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Mepo1g01039 214 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Mepo1g01039 214 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Mepo1g01039 214 MobiDBLite consensus disorder prediction 62 86 - -
Mepo1g01039 214 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Mepo1g01039 214 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Mepo1g01039 214 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Mepo1g01039 214 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Mepo1g01039 214 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Mepo1g01039 214 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 3 155 - -
Mepo1g01039 214 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Mepo1g01039 214 MobiDBLite consensus disorder prediction 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01039 Mepo-Chr1 10014533 10015869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01039 1 190 AP2-EREBP Transcription Factor Family AT1G15360 63.184 2.83e-77 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mepo1g01039 AP2 8.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01039 - - gsj:114375848 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01039 1 10014533 10015869 Mepo3g07437 3 87761443 87762620 ECH
Mepo1g01039 1 10014533 10015869 Mepo1g01039 1 10014533 10015869 ECH