Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01021 ATGTCTAGCTGCAGCATCGATGTTGCACCTGCTGAACAACTCTGCTACATCCCTTGCAACTTTTGCAATATTGTTCTTGCGGTGAGTGTGCCATGCAGTAGCTTGTTTGACATAGTGACCGTTCGATGTGGTCACTGCACAAATCTATGGTCTGTAAACATGGCCGCCGCGTTTCAGTCACTGTCATGGCAAGATGTTCAGGCACCTAGCCACTGCATGAATCCAGAGTATAGGATTCGAACTAGCTCCACTCCCAAATGCAACGATAGGATTGCAATGCGTTCTGCACCAACCACCCATGTTACTGAGGAAAGGGTTGTTAACCGCCCTCCCGAGAAGAGGCAACGTGTACCTTCTGCTTATAATCAGTTCATCAAGGAAGAGATTCAGAGGATCAAGGCTAATAATCCTGATATTAGCCACAGAGAAGCTTTTAGTACAGCTGCAAAGAACTGGGCACATTTTCCTCATATTCATTTTGGGCTGATGTTGGAGAGCAACAATCAAGCTAAGATGGAGAATGTCTCTGAGAAGCGTTTGATGTCTAGGGCTGCGCTAATGAACAAATGA 570 0.4596 MSSCSIDVAPAEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDVQAPSHCMNPEYRIRTSSTPKCNDRIAMRSAPTTHVTEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESNNQAKMENVSEKRLMSRAALMNK 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01021 189 CDD HMG-box_SF 116 152 - -
Mepo1g01021 189 Pfam YABBY protein 10 162 IPR006780 GO:0007275
Mepo1g01021 189 PANTHER PROTEIN YABBY 6-RELATED 1 172 IPR006780 GO:0007275
Mepo1g01021 189 Gene3D High mobility group box domain 101 180 IPR036910 -
Mepo1g01021 189 FunFam Axial regulator YABBY 107 179 - -
Mepo1g01021 189 SUPERFAMILY HMG-box 106 155 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01021 Mepo-Chr1 9843301 9847206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01021 7 172 C2C2-YABBY Transcription Factor Family AT2G26580 75.904 3.47e-89 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Mepo1g01021 YABBY 1.3e-69 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01021 K25796 - gmx:100804731 354.369