Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01018 ATGAATTCTGATAGGTTGATGAAATGGTTGTATGGCTACAACACAACCACATCATCAGCCGATAGTAACAATTTCGGCAGTCATGCTCCAGGCATCATCAAATCAATACAAATGCTTAAAACACAGTTTGGAAATCTACATGCATCATCACCATCATCTGATAATAATAATATGAATGATGTCATCAACAACAACAAGATGGTGTTGAATACTTCTTCTGTTTATGCTCATCATAGTCTCCTTGGAGGCTCGTCATCAAATTCACAACACCCTCCATCTGAGGCAAACAATATTGTTGCTACTAATGGTGATGAAGTCCGGGCTTCAAATAGTACCAACATGAAGAGGAAAAAAGAGGATATTCTTGATGATGGTAGAATCCACAGTCTACCGCACAATAAACATGGACCGTACACGTGTTCAGAGTGCAACAAAGTAATAGCAACATCACAGAAATTCGCTGCTCATGTATCAAGCCACTACAAGACTGAAAGTGAAAAAGAGAGAAGAAAGAGATACTTGTCAAGGATTCGAAAGAGACCAGATCTCCAGATTCAAAAGCTCGATGATGGAACAACTACTCTTGTTCCTGTCATTGCTTCTATTGATCAGTCACATGCTCCTTCCGTTAGTTACGATAATCCAAATATGAGTGCCCCTGCTCCTCCTTTAAGTGGGGTAAAAGTTAAACTAGAACCTGCTGATAATTAA 711 0.3924 MNSDRLMKWLYGYNTTTSSADSNNFGSHAPGIIKSIQMLKTQFGNLHASSPSSDNNNMNDVINNNKMVLNTSSVYAHHSLLGGSSSNSQHPPSEANNIVATNGDEVRASNSTNMKRKKEDILDDGRIHSLPHNKHGPYTCSECNKVIATSQKFAAHVSSHYKTESEKERRKRYLSRIRKRPDLQIQKLDDGTTTLVPVIASIDQSHAPSVSYDNPNMSAPAPPLSGVKVKLEPADN 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01018 236 ProSitePatterns Zinc finger C2H2 type domain signature. 140 160 IPR013087 -
Mepo1g01018 236 ProSiteProfiles Zinc finger C2H2 type domain profile. 138 165 IPR013087 -
Mepo1g01018 236 MobiDBLite consensus disorder prediction 80 103 - -
Mepo1g01018 236 SUPERFAMILY beta-beta-alpha zinc fingers 126 162 IPR036236 -
Mepo1g01018 236 MobiDBLite consensus disorder prediction 206 236 - -
Mepo1g01018 236 Gene3D Classic Zinc Finger 107 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01018 Mepo-Chr1 9797753 9798463 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01018 117 180 C2H2 Transcription Factor Family AT2G18490 57.812 6.87e-21 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo1g01018 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01018 - - mtr:112419833 229.95