Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01015 ATGAATTCTGATAGGTTGATGAAATGGTTGTATGGCTACACCACAACCACATCATCAGCCGATAGTAACAATTTCGGCAGTCATGCTCCAGGCATCATCAAATCAATACATATGCTTGAAACACAGTTTGGAAATCTACATGCCTCACCACCATCATCTGATAATAATAATATGAATGATGTCATCAACAACAACAAGATGGTGTTGAATACTTCTTCTGTTTATGCTCATCCTAGTCTCCTTGGAGGCTCGTCATCAAATTCACAACACCCTCCATCTGAGGCAAACAATATTGTTGCTACTAATGGTGATGAAGTCCGGGCTTCAAATAGTACCAACATGAAGAGGAAAAAAGAGGATATTCTTGATGATGGTAGAATCCACAGTCTACCGCACAATAAACATGGACCGTACACGTGTTCAGAGTGCAACAAAGTAATAGCAACATCACAGAAATTCGCTGCTCATGTATCAAGCCACTACAAGACTGAAAGTGAAGAAGAGAGAAGAAAGAGATACATGTCTAGGATCCGAAAGAGACCAGATCTCCAGATTCAAAAGCTCGATGATGGAACAACTACTCTTGTTCCTGTCATTGCTTCTATTGATCAATCACATGCTCCTTCCGCTAGTTACGATAATCCAAATATGAGTGCCCCTGCTCCTCCTCTAAGTGGGGTAAAAGTTAAACTAGAACCTGCTGATAATTAA 711 0.4037 MNSDRLMKWLYGYTTTTSSADSNNFGSHAPGIIKSIHMLETQFGNLHASPPSSDNNNMNDVINNNKMVLNTSSVYAHPSLLGGSSSNSQHPPSEANNIVATNGDEVRASNSTNMKRKKEDILDDGRIHSLPHNKHGPYTCSECNKVIATSQKFAAHVSSHYKTESEEERRKRYMSRIRKRPDLQIQKLDDGTTTLVPVIASIDQSHAPSASYDNPNMSAPAPPLSGVKVKLEPADN 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01015 236 ProSitePatterns Zinc finger C2H2 type domain signature. 140 160 IPR013087 -
Mepo1g01015 236 ProSiteProfiles Zinc finger C2H2 type domain profile. 138 165 IPR013087 -
Mepo1g01015 236 SUPERFAMILY beta-beta-alpha zinc fingers 126 162 IPR036236 -
Mepo1g01015 236 MobiDBLite consensus disorder prediction 206 236 - -
Mepo1g01015 236 MobiDBLite consensus disorder prediction 79 109 - -
Mepo1g01015 236 MobiDBLite consensus disorder prediction 79 113 - -
Mepo1g01015 236 Gene3D Classic Zinc Finger 107 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01015 Mepo-Chr1 9781075 9781785 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01015 119 197 C2H2 Transcription Factor Family AT5G22990 53.750 1.06e-20 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo1g01015 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01015 - - mtr:112419833 226.868