Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01005 ATGAGGGGGGAGGATGATTATATGCCTGGAAACATTTTAGAAATCGAGCTTCATAATTTCATGACATTTGATTACTTAAAATGTAAGCCCGGGCCTCGCTTGAATCTTGTAATTGGTCCAAATGGTTCTGGAAAGAGTTCTCTTGTATGTGCTATTGCTCTTGGCCTCTGTGGAGAGCCCCAGTTGCTTGGGCGAGCCACAAGTATTCAGGCATATGTTAAGCGGGGAGAAGATTCTGGCCACATTAAGATTACCTTGAGGGGAGACCATAAAGAGGATCACATTACAATTATGCGTAAAATAAACACCAGCAACAAGTCCGAATGGGTTTTAAATGGAAATACTGTGTCCAAAAAAGATGTGGCTGAAACCATTCAGAGGTTTAACATCCAAGTGAATAATTTGACTCAATTTTTACCGCAAGACAGGGTCTGTGAGTTTGCAAAGTTAACTCCTGTGCAACTTCTGGAAGAGACAGAAAAGGCTGTTGGTGATCCACGACTTCCAGAGCAACATCGTGCACTTATTGATAAAAGTCGTGCATTGAAGCATGTCGAGCTGTCTCTGGAGAAAAATGAAGGAACGTTAAATCAGTTGAAGGAACGTAATGCTGAATTAGAGAAGGATGTTGAACGTGTTCGTCAAAGAGATGAACTTCTTACCAAGGCCAAATCAATGAAAAAGAAATTGCCATGGCTGAAGTATGATATGAAGCAGGCTGAATATCGTGAAGCTAAGGAGCGTGAGAAGGCTGCAGCAAAGGAGTTTGAGAAGGCTGCAAAATTATTAAACGAACTTAAAGAACCTATTAAGAAACAGAAAGAGGAGAAAGCTGCATTAGATGCAAAATGCAAAAAGGCTAACAACCGAATAAGTGACAATGCCAAGAAGAGAATGGAACTTATGGAGAAAGAGAACCAATTAGATGTGGAATTACAAGGGAAGTACAAAGAGATGGACGAGTTGAGGAAGCAGGAAGAAACTCGGCAACAGAAATTGAAAAAAGCCAGGGAGGATCTTGCAGCTGCCGAACTTGAACTTGAGAGTCTAAACCCTTATGAACCTCCCAGGGACGAGATTCATAGACTGAGAGAGGAAATTGTGGAGTTGGATTATTCTGCTAATCAAGCGAGACAGAATAAGTCACAAGCAGAAAGTGAAATAAAGCAAAAAAAGTTCTCCTTAACGAAGTGTAAAGAGAGGTTGAAGGAAATGAATAATAAAAGTACCAAATGTTTGAATGCATTGCGAACATCTGGGGTTGAAAGAATTTTCGATGCTTATAAATGGGTCCAAGAGCATCGCAATGAATTCCACAAGGAGGTTTATGGCCCAGTTTTAGTTGAGGTGAATGTCTCGGATCAATCTCATGCTGGATATCTAGAGGGTCAAGTTGCTTGGTACACTTGGAAGTCTTTCATAACACAGGATCCTCGCGATCGGGACTTCTTGGTGAACAACCTACGGAACTACGATGTACCAGTTTTAAATTATACCGGTCATGATAACCAAAGAGAGCCGCCTCCTGAAATATCTGCCAATATGCGTGCTCTTGGTATCCACTCTCGTTTGGACCAAATTTTTGATGCTCCTGTTGCTGTCAAGGAGGTGTTGATTAGCCAATCTAATCTTGATCATTCATTTATTGGATCGAAAGAAACTGATCAGAAAGCTGATGGGGTCCCAAAATTGGGAATTACTAGTTTATGGACACCAGAAAATCACTATCACTGGTCTAAGTCTAGATATGGAAATCATGTCTCAGCAGTTGTTGAACAAGTGCAACGCCCTCGACTTCTAACGAATAATTTAAATGTGAGGGACATTGAGGATCTGAGCTCTCAGGAAAGGGAGTTTCAAGAACAAATTGCTTCCTTGGAGGAAAGTCTCAAAAAGTTTCAAGACGAGGAAAGAAGCTTTGTGAATCAGGCTGCTAATATTCGTAAACAGATGGAGGACATTCGTTCTGAAGCACAAAATAAGCAAAAAGAGCGACAAGCAATTGTTAGGCGTATTGAACAAAAGAAAGGGAAACTGAAATCAATGGAGGAGCAAGATGATTTAGATACGGAGTTAGCGAAGCTTGTTGATCAGGCAACAAATTGTAACATTCAGCGATTCCATAATGCAATTAAAATTAAGGATCTTCTTGTTGAAGCTGCCGGTCACAGACGAAGTTTTGTTGAACAACGTATGACTTTCATTGAATTTGATGCAAAGATTGGAGAAGCGGAGGCCAATCTGAAGCAGCATGAAAATTTTGCTATGCAGGCATCATTGCATTATAATAACTCTAAGAAAGAGGCTGAAGAATGCAGACAGAAGCTTACAGATTTACTGAACTATGCCAAGTCAATTGCCCGGCTCACACCTGACCTAGAGAAGGAGTTTCTTGAGATGCCTACTACAATTGAGGAGTTGGAAGCAGCTATCCAAGATACCACTTCTCAAGCCAATTCAATCCTTTTTGTCAATAGTAACATATTGGAACAATATGAGGCTCGTCAAAGACAGATAGAAGATCTTGCAAAAAAACTTGATGCAGACAAGAAGGAATCTACAAGGTGTCTAGCTGAATTGGATAATATTAAGGGAAAATGGCTCCCTACATTGAGAAACCTTGTGGCCCAGATAAATGAAACTTTTAGTCAAAATTTTCAACAGATGGCTGTTGCTGGAGAAGTTTTACTAGATGAGCATGATACGGACTTTGATCAATATGGAATACATATAAAAGTTAAATTCAGAGAAAATGGACAGCTTGAAGTTCTCAGTGCCCATCATCAATCTGGAGGGGAGCGATCAGTTTCAACTATTGTTTATCTCGTTTCTCTTCAAGATCTTACAAACTGCCCATTTAGAGTTGTTGATGAGATCAACCAAGGAATGGATCCAATAAATGAAAGGAAGATGTTTCAGCAACTAGTGAGAGCAGCAAGCAAGCCAAATACACCACAGTGTTTCTTACTTACCCCAAAGTTGTTACCAGATCTGCAATATAGCGAGGCATGCAGTATATTGAATGTAATGAATGGGCCTTGGATTGAGCAACCCTCAAAGGTCTGGACTGCTGGTGATCGATGGAGTATTATCACTGGACATGTTGGAGAGACCATTTGTTAA 3123 0.4041 MRGEDDYMPGNILEIELHNFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALGLCGEPQLLGRATSIQAYVKRGEDSGHIKITLRGDHKEDHITIMRKINTSNKSEWVLNGNTVSKKDVAETIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPRLPEQHRALIDKSRALKHVELSLEKNEGTLNQLKERNAELEKDVERVRQRDELLTKAKSMKKKLPWLKYDMKQAEYREAKEREKAAAKEFEKAAKLLNELKEPIKKQKEEKAALDAKCKKANNRISDNAKKRMELMEKENQLDVELQGKYKEMDELRKQEETRQQKLKKAREDLAAAELELESLNPYEPPRDEIHRLREEIVELDYSANQARQNKSQAESEIKQKKFSLTKCKERLKEMNNKSTKCLNALRTSGVERIFDAYKWVQEHRNEFHKEVYGPVLVEVNVSDQSHAGYLEGQVAWYTWKSFITQDPRDRDFLVNNLRNYDVPVLNYTGHDNQREPPPEISANMRALGIHSRLDQIFDAPVAVKEVLISQSNLDHSFIGSKETDQKADGVPKLGITSLWTPENHYHWSKSRYGNHVSAVVEQVQRPRLLTNNLNVRDIEDLSSQEREFQEQIASLEESLKKFQDEERSFVNQAANIRKQMEDIRSEAQNKQKERQAIVRRIEQKKGKLKSMEEQDDLDTELAKLVDQATNCNIQRFHNAIKIKDLLVEAAGHRRSFVEQRMTFIEFDAKIGEAEANLKQHENFAMQASLHYNNSKKEAEECRQKLTDLLNYAKSIARLTPDLEKEFLEMPTTIEELEAAIQDTTSQANSILFVNSNILEQYEARQRQIEDLAKKLDADKKESTRCLAELDNIKGKWLPTLRNLVAQINETFSQNFQQMAVAGEVLLDEHDTDFDQYGIHIKVKFRENGQLEVLSAHHQSGGERSVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILNVMNGPWIEQPSKVWTAGDRWSIITGHVGETIC 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01005 1040 Pfam RecF/RecN/SMC N terminal domain 12 981 IPR003395 -
Mepo1g01005 1040 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 982 IPR027417 -
Mepo1g01005 1040 Coils Coil 235 290 - -
Mepo1g01005 1040 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 763 991 IPR027417 -
Mepo1g01005 1040 Coils Coil 305 346 - -
Mepo1g01005 1040 FunFam Structural maintenance of chromosomes 5 836 1007 - -
Mepo1g01005 1040 Gene3D - 834 1009 IPR027417 -
Mepo1g01005 1040 Coils Coil 182 223 - -
Mepo1g01005 1040 Gene3D - 11 216 IPR027417 -
Mepo1g01005 1040 Coils Coil 360 394 - -
Mepo1g01005 1040 Coils Coil 609 685 - -
Mepo1g01005 1040 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 4 1031 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Mepo1g01005 1040 Coils Coil 825 852 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01005 Mepo-Chr1 9641096 9658433 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01005 2 1029 Structural Maintenance of Chromosomes family AT5G15920 62.354 0.0 1302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01005 K22803 - gmx:100778678 1609.35