Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01002 ATGGAGCTTCATTTGGGTCTTGCTCTCTCCACTTATAATAATTCTCATTTCCCTTTGAACCATGACAATAAGAAACGAAGATTTTCTCAACTCTTGGAGCATGCAGTAGAAACAACCAACCTTCCCACTCTTTCTCTTCTCCCATTAACTCCTGGCCACTCAGATGATCATGATGATGATGATCAAAACTGCTCTCACAGCTCTTCTACCACCATCACCAAGAGCAATGAAGATGATGAAGAAGCTCTTGTTGGATGGCCCCCGGTTAATTGTAGGAGGAAGAAACTTGGTTCCAATGAAAATGATGTTGAGGATCACGTGGTCCCCATTGATGGTTCTCATAATCACAGAAATTACGTGAAGGTGAAGATGGAAGGTGTAGGAATAGCTCGAAAGGTTAATCTTAGCATGCACCATTCATTTCATACTCTCAACCAAACTTTGATGGACATGTTTGAAAAATGTGATCATGATCAACAACAGTATGAACTGGTTTATCAAGACAAAGAAGGTGATTGGCTTCTTGCTCAAGATATTTCATGGAGAAGTTTCATTCAGTGTGCGCAACGCCTCAAATTGCTTAAGAGCAGGGGATAG 597 0.4104 MELHLGLALSTYNNSHFPLNHDNKKRRFSQLLEHAVETTNLPTLSLLPLTPGHSDDHDDDDQNCSHSSSTTITKSNEDDEEALVGWPPVNCRRKKLGSNENDVEDHVVPIDGSHNHRNYVKVKMEGVGIARKVNLSMHHSFHTLNQTLMDMFEKCDHDQQQYELVYQDKEGDWLLAQDISWRSFIQCAQRLKLLKSRG 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01002 198 Gene3D - 112 198 - -
Mepo1g01002 198 ProSiteProfiles PB1 domain profile. 117 198 IPR000270 GO:0005515
Mepo1g01002 198 MobiDBLite consensus disorder prediction 43 82 - -
Mepo1g01002 198 Pfam AUX/IAA family 22 196 IPR033389 -
Mepo1g01002 198 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 2 196 IPR003311 GO:0005634|GO:0006355
Mepo1g01002 198 SUPERFAMILY CAD & PB1 domains 114 193 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01002 114 196 B3 DNA Binding Superfamily AT3G61830 30.588 9.20e-09 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mepo1g01002 AUX_IAA 8.8e-18 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01002 K14484 - gmx:100808466 187.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01002 1 9623793 9626205 Mepo1g01002 1 9623793 9626205 ECH