Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00998 ATGAAAGAAAGATTTGGACGAGAGATTCGTGTTTTTGAAACATCTTCACTTTCTCCATCACCAAATGCAACAACAAACAAAGAAGACGAGACCGATGAGTTCTATGAGTTGACTGATAAAGATTATTACAAACTCTTGGCTACTAAAAAGGAAGATAAAGTTTTGAAGACTCGAAGTCTTAGAGAAGCAGAAGTGGCAGCTTGCAGGTCAAGGATAACCAAGGCTGTAATTAGAGTTCGTTTTCCTGATAATCACACGTTGGAAGCTACATTTAATCCATCAGAAACTATCCAAAGTTTAGTTGATCTACTCAATAAAGTGATTGCACAACCAGAGAAGCCATTTGATTTATATACTACTACGCCCAAGAAGAAGCTGATCAAAGATGTTTCCCAGGATTTCTATAGTGCTGGATTTTGTCCTTGTGCCATTGTGTACTTCTCATATGATGTTTCAAAAGGTACTTTTAGAGTCTTATCCTTGGATGAGACTTCATTTATAACCCTGTTCAATAGACCTAATAAATACATTCCCCTTCAATATCAACCTAGTCCTCAAGGTTGA 564 0.3688 MKERFGREIRVFETSSLSPSPNATTNKEDETDEFYELTDKDYYKLLATKKEDKVLKTRSLREAEVAACRSRITKAVIRVRFPDNHTLEATFNPSETIQSLVDLLNKVIAQPEKPFDLYTTTPKKKLIKDVSQDFYSAGFCPCAIVYFSYDVSKGTFRVLSLDETSFITLFNRPNKYIPLQYQPSPQG 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00998 187 ProSiteProfiles UBX domain profile. 70 147 IPR001012 GO:0005515
Mepo1g00998 187 SUPERFAMILY Ubiquitin-like 49 147 IPR029071 -
Mepo1g00998 187 CDD UBX2_UBXN9 75 149 - -
Mepo1g00998 187 Gene3D - 12 146 - -
Mepo1g00998 187 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 1 156 IPR044232 GO:0032984|GO:0051117
Mepo1g00998 187 Pfam UBX domain 73 136 IPR001012 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00998 Mepo-Chr1 9568603 9569715 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00998 3 95 C2H2 Transcription Factor Family AT2G01650 32.990 1.40e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00998 K15627 - gmx:100818386 225.328