Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00974 ATGAATGTTATTGTTGTGTTCTTGGTGCTGTTGCTGCAATTGTCAACAATTTTTGGGTCTGAAGTTGTGTTACTGACAAAGGGTTGTGGCGATAATTTAGTAGCAAATTCATATTCTAGTCATGGTGAGGAATTGTTCTACATAAATGGAAATGTGGTAAACAAAAGTGATTTCTGTAAAGCTCTCCAATTGTATATTGCAAATGGTTGTGATGTGAAGGATTACTTTGGAAGCAACAACTGTGTGTTAGATTTGGATGTCTCCTTTGTGTATTTGCCTTCAAAAGCAGGAAGGAAACTTTTGCAGAAAGACTTGAAGAATAATTCGACGTCACAAGGAGATACTAAGCAAGTGTCAAGCAGCCAAGTTGGAATTTTTGCGAGTGGAGCTTTGTTGGTATGTTGTGCCGTTGTTTGTCCTTGTTTCTATGGGAAGAGAAGAAAGGCAACTTCTCATGCTGTTCTGGAAAAGGACCCAAATTCAATGGAATTAGGTTCCTCCTTTGAACCATCAGTTTCTGATAAGATCCCGGCTAGTCCACTTCGGGTGCCACCTAGTCCGTCGAGATTCTCAATGTCTCCAAAACTCAGCAGACTTCAGTCATTGCATCTCAACCTGAGTCAGGTTTCTAAAGCTACCCGTAATTTTTCAGAAACATTACAAATAGGAGAAGGAGGTTTTGGAACTGTCTACAAGGCTCATTTAGACGATGGCCTGGTTGTGGCTGTAAAACGTGCAAAAAGGGAACATTTTGAGAGTTTGAGAACAGAATTCAGCAGTGAAGTCGAACTTCTGGCCAAAATTGATCATCGAAACCTTGTGAAGCTACTCGGCTATATTGACAAAGGAAACGAACGTATCCTTATTACGGAGTTTGTGGCAAATGGTACTCTTCGAGAACATTTGGATGGTTTGCGTGGAAAAATTCTGGATTTCAATCAGCGCCTTGAAATTGCAATTGATGTTGCACATGGATTGACCTATCTGCATCTGTATGCAGAAAAACAAATTATCCATCGCGATGTGAAATCATCCAACATTCTTCTGACTGAAAGCATGCGAGCTAAAGTAGCTGATTTTGGATTTGCAAAGCTTGGTCCTGTAAACAACGACCATACACACATTTCTACCAAAGTGAAGGGAACAGTCGGCTATTTGGACCCTGAGTATATGAAAACATACCATCTCACTCCAAAAAGTGATGTTTACTCATTTGGAATTTTGCTTTTAGAAATACTGACTGGCCGTCGCCCTGTGGAGCTGAAAAAAGGTCCTGAAGAGCGAGTTACATTAAGATGGGCCTTCAGGAAATATAATGAAGGAAGTGTGGTGGAACTGCTTGATCCTTTAATGCAAGAAGCTGTAAAAACAGATGTTGCTGGGAAGATGTTTGATTTGGCATTTAATTGTGCAGCACCAGTAAGATCAGATAGACCTGACATGAAAACAGTGGGTGAGCAATTGTGGGCAATAAGGGCAGATTACCTCAAGAGTAGTAGCACAACTGCAAGGAGAGAATGA 1521 0.407 MNVIVVFLVLLLQLSTIFGSEVVLLTKGCGDNLVANSYSSHGEELFYINGNVVNKSDFCKALQLYIANGCDVKDYFGSNNCVLDLDVSFVYLPSKAGRKLLQKDLKNNSTSQGDTKQVSSSQVGIFASGALLVCCAVVCPCFYGKRRKATSHAVLEKDPNSMELGSSFEPSVSDKIPASPLRVPPSPSRFSMSPKLSRLQSLHLNLSQVSKATRNFSETLQIGEGGFGTVYKAHLDDGLVVAVKRAKREHFESLRTEFSSEVELLAKIDHRNLVKLLGYIDKGNERILITEFVANGTLREHLDGLRGKILDFNQRLEIAIDVAHGLTYLHLYAEKQIIHRDVKSSNILLTESMRAKVADFGFAKLGPVNNDHTHISTKVKGTVGYLDPEYMKTYHLTPKSDVYSFGILLLEILTGRRPVELKKGPEERVTLRWAFRKYNEGSVVELLDPLMQEAVKTDVAGKMFDLAFNCAAPVRSDRPDMKTVGEQLWAIRADYLKSSSTTARRE 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00974 506 Gene3D Phosphorylase Kinase; domain 1 187 292 - -
Mepo1g00974 506 SMART serkin_6 216 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00974 506 CDD STKc_IRAK 222 488 - -
Mepo1g00974 506 ProSitePatterns Protein kinases ATP-binding region signature. 222 244 IPR017441 GO:0005524
Mepo1g00974 506 Pfam Protein tyrosine and serine/threonine kinase 221 488 IPR001245 GO:0004672|GO:0006468
Mepo1g00974 506 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 293 502 - -
Mepo1g00974 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 337 349 IPR008271 GO:0004672|GO:0006468
Mepo1g00974 506 PANTHER OS01G0750732 PROTEIN 99 491 - -
Mepo1g00974 506 MobiDBLite consensus disorder prediction 166 190 - -
Mepo1g00974 506 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 188 292 - -
Mepo1g00974 506 SUPERFAMILY Protein kinase-like (PK-like) 197 491 IPR011009 -
Mepo1g00974 506 ProSiteProfiles Protein kinase domain profile. 216 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00974 506 Gene3D Transferase(Phosphotransferase) domain 1 293 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00974 Mepo-Chr1 9291244 9296619 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00974 188 492 Receptor kinase-like Gene Family AT3G46290 44.660 2.83e-73 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Mepo1g00974 PK_Tyr_Ser-Thr 3.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00974 - - aprc:113845864 830.861