Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00941 ATGTCTTCCGAGATCGAGGTCGTCGAGGAGGTTCAATCTCGCCGCGATCAACAATCGCCACCGTCATCATCATCTTCCGCTGTCGTCGACGATGAAGTCGCCAGCCGGAACGACGTGTACACTGCCGCGGCTTATGGGGATTTGGAGAAGCTACATAGATTGGTGGAGATTGAAGGTTGTCTTGTTAACGAGCCTGATGGTTTGGGTTACTACGCTCTTCAGTGGGCTGCTCTTAATAACCGCACTGCTGCTGCTCAGTACATTATTGAGCATGGTGGAGATGTAAATGCAACAGATCATTCTGGCCAGACAGCATTGCATTGGAGTGCGGTTCGGGGTGCTATTCAGGTTGCAGAGCTATTACTCCAAGAGGGTGCTCGAGTGAACGCCGCTGACATGAATGGGTATCAGATAACACATGTTGCTGCTCAATATGGTCAGACGGCTTTCCTTTACTATGTTATTTCAAAATGGAATGCTGACCCTGATGCTCCTGATAAAGATGGAAGATGCCCCTTGCATTGGGCTGCTTACAAAGGTTTTGCTGATTGTATACGTCTTCTGTTATTTCTTGATGCACATCGGGGTCGTCCGGATAAAGACGGTACCACTCCTCTCCATTGGGCTGCTATGCGAGGTAACTTGGAGGCCTGTACTGTGTTAGTACAGGCTGGCAAAAAGGAAGACCTGGTAGTGACTGATATTAGTGGCCTTACACCAGCTCAGCTTGCTTCTGATAGGAAACACAGACAAGTTGCTTTTTTCCTTGGAAATGCCCGAATGCTTCTTGATAAAAGCTTTGACTCTAACAGCCGCCTTGGAAAGATATCTAAATTAGGACTTGCTCCTGTACTTTGGTGCATAATTTTTGTGCTATTGGTCACCTATATTCATTCGGTCATCTTGGCAACAAATATGCCAAAGCTGACAGCATCAGCTGGCCTTTTTGCATGGTTTGGAGTGTTGCTTGCTACTGTTGGATTGGTGATGTTTTATAGGTGTAGCAGCAAGGATCCAGGTTATATCAGAACGAACGGGCATGACACTCAGAATATGAAAGATGATGAGCCTCTTTTGAAGATTGAGAAAAATAATCCTGCTTTGCTAGCTGGAAATTGGTCCCAACTTTGTGCAACATGCAAGATTGTCAGACCTCTTCGTGCAAAACATTGTTCTACATGTGATCGTTGTGTGGAGCAATTTGACCATCATTGTCCTTGGGTATCCAATTGCATTGGCAAGAAGAATAAATGGGATTTCTTTGCTTTTCTTATTCTTGAAGTTTCAGCAATGTTGGTTACTGGTGGAGTATGTCTTACAAGAGTACTGACTGATCCACTTGCTCCTTCTTCGTTTGGGGCATGGATTAATTATGCTGGTAAAAATCACATTGGTGCAATATCATTTCTAATTGCTGATTTTTTCCTCTTCTTCGGAGTATTTGCTTTGACAGCTGTTCAGGCTAGTCAGATATCACGCAATATTACAACAAATGAAATGGCAAATGCATTGCGGTATAGCTACCTCAGAGGTCCAGGTGGTAGATTCAGAAACCCATATGATCATGGTATCAAGAAGAACTGTTCTGATTTTTTGATCAATGGGTACAATGAAGACTTGGAGTATGTTGAAGAATCAGGCAACTCTGAGGAGGGTCTAGGAATGATGCACATGGCAAGGGGCTCAACCATAACAAATGGAGACTCACATTCTCATTCTGATCATGCCAACGGAAACGGAAATGGCCATGTTGTTATTAATGTGGATTCAAACAGTACCAACTCAAAAACACATCATGGTCATAGTAATGGTCATGTTCATTCTTCACATTGTAGTCATAGTAACCAAGGTAAAACCAGAAATGACAGCATTCCTGTGGGCTTAGGTCTTGGCCTCGGACGGAACACCAGATCTGTTTCATCCTCGTTGTGA 1932 0.4394 MSSEIEVVEEVQSRRDQQSPPSSSSSAVVDDEVASRNDVYTAAAYGDLEKLHRLVEIEGCLVNEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNATDHSGQTALHWSAVRGAIQVAELLLQEGARVNAADMNGYQITHVAAQYGQTAFLYYVISKWNADPDAPDKDGRCPLHWAAYKGFADCIRLLLFLDAHRGRPDKDGTTPLHWAAMRGNLEACTVLVQAGKKEDLVVTDISGLTPAQLASDRKHRQVAFFLGNARMLLDKSFDSNSRLGKISKLGLAPVLWCIIFVLLVTYIHSVILATNMPKLTASAGLFAWFGVLLATVGLVMFYRCSSKDPGYIRTNGHDTQNMKDDEPLLKIEKNNPALLAGNWSQLCATCKIVRPLRAKHCSTCDRCVEQFDHHCPWVSNCIGKKNKWDFFAFLILEVSAMLVTGGVCLTRVLTDPLAPSSFGAWINYAGKNHIGAISFLIADFFLFFGVFALTAVQASQISRNITTNEMANALRYSYLRGPGGRFRNPYDHGIKKNCSDFLINGYNEDLEYVEESGNSEEGLGMMHMARGSTITNGDSHSHSDHANGNGNGHVVINVDSNSTNSKTHHGHSNGHVHSSHCSHSNQGKTRNDSIPVGLGLGLGRNTRSVSSSL 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00941 643 ProSiteProfiles Ankyrin repeat region circular profile. 168 189 - -
Mepo1g00941 643 MobiDBLite consensus disorder prediction 14 31 - -
Mepo1g00941 643 ProSiteProfiles DHHC domain profile. 375 425 - -
Mepo1g00941 643 ProSiteProfiles Ankyrin repeat region circular profile. 201 225 - -
Mepo1g00941 643 PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED 18 542 - -
Mepo1g00941 643 MobiDBLite consensus disorder prediction 563 599 - -
Mepo1g00941 643 ProSiteProfiles Ankyrin repeat profile. 168 200 IPR002110 GO:0005515
Mepo1g00941 643 ProSiteProfiles Ankyrin repeat profile. 68 100 IPR002110 GO:0005515
Mepo1g00941 643 MobiDBLite consensus disorder prediction 563 643 - -
Mepo1g00941 643 ProSiteProfiles Ankyrin repeat region circular profile. 101 132 - -
Mepo1g00941 643 Pfam Ankyrin repeats (many copies) 203 256 IPR002110 GO:0005515
Mepo1g00941 643 SUPERFAMILY Ankyrin repeat 37 257 IPR036770 -
Mepo1g00941 643 SMART ANK_2a 168 200 IPR002110 GO:0005515
Mepo1g00941 643 SMART ANK_2a 201 232 IPR002110 GO:0005515
Mepo1g00941 643 SMART ANK_2a 134 164 IPR002110 GO:0005515
Mepo1g00941 643 SMART ANK_2a 68 97 IPR002110 GO:0005515
Mepo1g00941 643 SMART ANK_2a 236 265 IPR002110 GO:0005515
Mepo1g00941 643 SMART ANK_2a 34 64 IPR002110 GO:0005515
Mepo1g00941 643 SMART ANK_2a 101 130 IPR002110 GO:0005515
Mepo1g00941 643 MobiDBLite consensus disorder prediction 1 31 - -
Mepo1g00941 643 FunFam S-acyltransferase 23 154 - -
Mepo1g00941 643 MobiDBLite consensus disorder prediction 607 622 - -
Mepo1g00941 643 ProSiteProfiles Ankyrin repeat profile. 201 233 IPR002110 GO:0005515
Mepo1g00941 643 Pfam Ankyrin repeats (3 copies) 41 132 IPR002110 GO:0005515
Mepo1g00941 643 Pfam DHHC palmitoyltransferase 375 502 IPR001594 GO:0016409
Mepo1g00941 643 Gene3D - 6 289 IPR036770 -
Mepo1g00941 643 ProSiteProfiles Ankyrin repeat profile. 101 133 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00941 Mepo-Chr1 9041990 9050320 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00941 42 221 Ion Channels AT2G25600 32.044 4.00e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00941 K20032 - gmx:100788923 1073.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00941 1 9041990 9050320 Mepo1g00941 1 9041990 9050320 ECH