Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00924 ATGAAGCCTTCTTGTGTAATAGTCTCTCTTCTCATTTTGTCACTTCTTCTTACAAAAACTCAAGGGATACGTTTGGGAAAAGGGTCTTTAGCATTTGAGCAACAAAAACAACATGATGAGGAAAGAAGCACCTTGTTGAAAAGAAGTAACACTGATTCTGAGGAAGCTACTCTTTGCAATGACCAACAAAAATGCACAGGAAATATAAAGAATAGGAAACTTGTTACCACTTCAATTTCTACAACTAAATCCTTGTCAAAGAATGTGAAGAACAGTGAGGATGTGGCTCACACCTCAGTAAATGGCAATACTAGAAATGTGAATGTGAATGGGGAAGCAAAGGAAATAAAAAAATTCTATTTTTGTTATATTAAAGCATTTTTCAAAAACAAATTAAGGAAAAATAAAAAGGCGGCGGCGAAGACCGACTCATTGAGCCGATACTATAGCAAAGCGTGGGAGATAATCCAGTACTCTACATATGAACTGAGAACTTCATGCACTCTACCCTGTTTCTTCAATAGTGAAAAAAACCCGTGCGCTTTTACAAGACTCAGCGGTGAAAGCTATAACGCTGCTTCAACACCCACTCTCCACTATTCAATCCCTAACCCTTCTTCCCCCAATTCGCTTCTACTTCAAGTGTATTGTGTGGACTGGAGAATGGGAAGTAACAGCGTTGAAAAGATCCCTAGCAATAACAGCACTGGAAGTTCAGAAACCACTATTGAGATAAAGCTCAAAACACTTGATTCACAAACTTATACTCTCAAAGTGGATAAACAGATGCCAGTCCCTGCTTTGAAAGAACAGATTGCTACTGTAACCGGAGTGTTATCAGAACAGCAGCGCTTAATTTGCCAAGGGAAAGTTCTAAAGGATGATCAACTATTGTCTGCATACCATGTTGAAGATGGTCACACATTGCATCTGGTTGTGAGGCAACCTGATCTGCCACCCCCAGGAAGTCTGCCCAATCATGCAGCGACTGAGCCAAATTCAAGCACAAGCCATAGTCACAGTACTCAAGTCGCTCCAGGTGTCTTCATTGAAACATTCAACGTTCCTATTCAGGGCGATGGAGTTCCACCTGAAATAAATAGGATTGTGTCTGCTGTTTTAGGCTCGATCACTGGACTTCCAAATTTTGCAAGTGGTGGTGAAGGGATTGTTGTCAGGGAGCATGATTCCCAAGGCCTTGGAAGAACTTCAGATTCTAGTGGAACATCAGACCCATTCCGTCCCCTACTTGATCAAACTGGTTCACAGAGTGTATCAGATAGATTACGGAATACTTTTGGACTTCCGGCGTCAGTTTCTCTAGGGTCTTTGCAGCCTCCTGTTATTCCTGGTTCTTTGACAACTTTGTCCCAGTATCTAAGTCATATGAGTCGTGAATTTGATACAATTGTCAGAGAAGGGGGGAATGCCCAAGCAGCCGAGGCTCATAGTAATGAAGCAATGGGATCTGGTTCTTCACGTTTGGGTTCAACACCAGAAAATCTCCCATCACCTGCATCCTTGGCAGAAGTCTTGCTTTCCACGAGACAAATGATCATCGAACAAGCTGGGGAGTGCATACTTCAACTAGCAAGACAACTAGAGAATCAAGCAGATATAACTGATGCCCCCTCGCGATCAACCACTCAATCTAGGGCATTGAGGACTGGACTATTGTTTTATAACCTTGGTGCATTTTTACTTGAGCTTGGTCGTACAACTATGACATTGCGTTTAGGTCAAACACCGGCTGAAGCTGTAGTTAATGGTGGACCTGCGGTTTTTATATCACCTACTGGTCCTAATCATATCATGGTTCAGCCTCTTCCTTTTCAAGCTGGAGCAAGCTTTGGTGCTGTCCCTGTAGGAGCTGCACAGACTGACTCAAGTTTAGGTAGTGGACTTGGCTCAAGTCTTTTCCCAAGGCGCATCGATATACAGATAAGACGAGGCACTTCAACAACCACACCCAATGCCAGCCAAGAAGAGCGTGGGGATACACAATCTGCTTCAGTGCAAAGAAATCCAGTTGAAAGTTCTGCTAGTCAAGCAACCTCTAGGCGTCCAGATGCATCTATTGCTGGAGAATCAGGAATAAGGATAGTGCCGCTTAGAACCATGGTTGCAGCAGTACCTGGTCCCTTGGGCCGTGCTTCTTCAGAACCATCTGGTAATTCTACTGGGCTTTACCATCCCGTTCTTGGGAGATTTCAACGTGTAACTACAGGGCAGGCAAATAGTGAACAGGGATCTCAATCAGCAAGTCAGCATCGTGCTGCAACACATTCAACTCCTGAATCCACATTGCAAAGGCAAAGCACGGAAGACTCTACAAGGAATGGCACCTCTTCAACTCCAAACACAAGACAAGAGCCATCTAATTCTCGTGTTGTAAATATCAATATTCTGGCAGCTGGTGGGCCCCAAAACAACCAAGAATCTGATAGACAGATACCAAGCAGTGTGTATCAGTTTTTAAGAACACTCTTTCCCACTGGGGAAATACACATGGAGGATTCTAGCTTACAAGGAGCAAATGCAAGTTCCACCTCAGTGCATGCTGCAACATCAAGGGGTGCTCCCGAAGCCCCTGAAGCTGAACCTGCTGTTAGTGCTGAAGGAGTATTTTTGTCTAATGTACTCCGTGAGATCATGCCGGTCATATCTCAACAAGTAGGGTCTGAGAGAAATCCTTCTGATGATCAAGCGGCTCAAGATTCGTCAACCCAGGTTGAAACTAATGCTGGGACATCGCGCAGACACAGTGGTTCTGAATCAGGTGCTCCAGATCCAAAACGCCAAAAGATGGAATGA 2814 0.4403 MKPSCVIVSLLILSLLLTKTQGIRLGKGSLAFEQQKQHDEERSTLLKRSNTDSEEATLCNDQQKCTGNIKNRKLVTTSISTTKSLSKNVKNSEDVAHTSVNGNTRNVNVNGEAKEIKKFYFCYIKAFFKNKLRKNKKAAAKTDSLSRYYSKAWEIIQYSTYELRTSCTLPCFFNSEKNPCAFTRLSGESYNAASTPTLHYSIPNPSSPNSLLLQVYCVDWRMGSNSVEKIPSNNSTGSSETTIEIKLKTLDSQTYTLKVDKQMPVPALKEQIATVTGVLSEQQRLICQGKVLKDDQLLSAYHVEDGHTLHLVVRQPDLPPPGSLPNHAATEPNSSTSHSHSTQVAPGVFIETFNVPIQGDGVPPEINRIVSAVLGSITGLPNFASGGEGIVVREHDSQGLGRTSDSSGTSDPFRPLLDQTGSQSVSDRLRNTFGLPASVSLGSLQPPVIPGSLTTLSQYLSHMSREFDTIVREGGNAQAAEAHSNEAMGSGSSRLGSTPENLPSPASLAEVLLSTRQMIIEQAGECILQLARQLENQADITDAPSRSTTQSRALRTGLLFYNLGAFLLELGRTTMTLRLGQTPAEAVVNGGPAVFISPTGPNHIMVQPLPFQAGASFGAVPVGAAQTDSSLGSGLGSSLFPRRIDIQIRRGTSTTTPNASQEERGDTQSASVQRNPVESSASQATSRRPDASIAGESGIRIVPLRTMVAAVPGPLGRASSEPSGNSTGLYHPVLGRFQRVTTGQANSEQGSQSASQHRAATHSTPESTLQRQSTEDSTRNGTSSTPNTRQEPSNSRVVNINILAAGGPQNNQESDRQIPSSVYQFLRTLFPTGEIHMEDSSLQGANASSTSVHAATSRGAPEAPEAEPAVSAEGVFLSNVLREIMPVISQQVGSERNPSDDQAAQDSSTQVETNAGTSRRHSGSESGAPDPKRQKME 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00924 937 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 230 928 - -
Mepo1g00924 937 FunFam Large proline-rich protein BAG6 235 328 - -
Mepo1g00924 937 MobiDBLite consensus disorder prediction 647 697 - -
Mepo1g00924 937 Pfam Ubiquitin family 245 315 IPR000626 GO:0005515
Mepo1g00924 937 SMART ubq_7 243 314 IPR000626 GO:0005515
Mepo1g00924 937 MobiDBLite consensus disorder prediction 327 343 - -
Mepo1g00924 937 MobiDBLite consensus disorder prediction 476 503 - -
Mepo1g00924 937 Gene3D - 236 337 - -
Mepo1g00924 937 MobiDBLite consensus disorder prediction 401 425 - -
Mepo1g00924 937 MobiDBLite consensus disorder prediction 890 924 - -
Mepo1g00924 937 MobiDBLite consensus disorder prediction 742 795 - -
Mepo1g00924 937 PRINTS Ubiquitin signature 253 273 IPR019956 -
Mepo1g00924 937 PRINTS Ubiquitin signature 295 316 IPR019956 -
Mepo1g00924 937 PRINTS Ubiquitin signature 274 294 IPR019956 -
Mepo1g00924 937 MobiDBLite consensus disorder prediction 840 869 - -
Mepo1g00924 937 MobiDBLite consensus disorder prediction 648 690 - -
Mepo1g00924 937 SUPERFAMILY Ubiquitin-like 232 332 IPR029071 -
Mepo1g00924 937 MobiDBLite consensus disorder prediction 890 937 - -
Mepo1g00924 937 ProSiteProfiles Ubiquitin domain profile. 243 318 IPR000626 GO:0005515
Mepo1g00924 937 MobiDBLite consensus disorder prediction 314 343 - -
Mepo1g00924 937 MobiDBLite consensus disorder prediction 840 856 - -
Mepo1g00924 937 MobiDBLite consensus disorder prediction 483 503 - -
Mepo1g00924 937 MobiDBLite consensus disorder prediction 397 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00924 Mepo-Chr1 8834686 8852791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00924 243 314 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 38.889 7.03e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00924 K23390 - gmx:100783070 1042.34