Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00917 ATGGGTTCCACCTCTAGTCGACTTGGGTCTCGCTCTTCTTCTTCTTCTACTCAAAGGGTCAACAACAACCATCGCTTCAGATTCTCTTCCTTTCTCTGTGGTGCTTCCACCTCTCGCTCCACTTCTCAGTTGGAAGGACATCAATATGAAGAACTTCAGGTTGATCCAGCTAGAGATTTTGATGATCAAATTCAGAAACTCGCTGGTGAGTCGACATTATCAAGTGCAGAAGAAGTTAGATTTAGTTGTTGTGCTCAAGCTGAAAGTTCAACCTCGACCAATATGGGAACTGGATTCCGCGAGAATGCTACTGTTGAAGGTTCTTTTGGAAATGCTGCTACAAGTAGTCAGAGGAATTGCTTGTCTGAACAAAAGGAGCTAGTCCCTCCTTATCGGGTAAGTGCTGGTCATAGCCATCCTGAATCATATAGTGATAGCAACAACACAGCTAGTACTTCATTGGTTGAACAGAAATCTTCAGATCCAGTCTCTCTCTCTGTTAATGATTCTGCTAACAAGGATAGAATCAATAATGTTGATGATCCAGTGCTTAGTGGCGTCTCTCAAATATCTCATGAGACCGCGCGTCCAAGGAGCCCAATCTCTCAAGAGTATGGAAATTCCAGTTCTGGTGAAATTTCTGTTGAGATCAACACAGATGCAGGCATATCTATCCATAGTTCTTCCATTCCTGTTTCTCAAGCTTCTAATACTCTACCAGCTTCTCAAGTGCCAGAAGATGGAGCTCGTCACGAAACATTACCTTCAGGTTTAGGTATTCTTGTGTCCAATCGGGAAATAGTACATGGAAATGATGGTCTTTTTCAAGTTGATGTGGTCGCAATATCTTCCAACATTTTGTCTGGCAGCAATGCAGATGCCGATGATCATGACGCCAGAAGGAATAGTAGAAGATTATTTTGGGATGCTTTTTCACAACGCAGTTCAAGAAGGCTTGGCGATTCTCCAACCATCGTTTTCTCTTCTGGAGGCGCTGATGATTTGGGATCTCAAGATCGGTGGCATGTTGATTTTGATGAGGATTTATCAAATTATGGTGTTGGAGGTGTGTCTGGACATAGGGGCAGCAGAATTCACAGATTGAATGAAAGAGTGCGAAACTCAAGATCTGAGATCTGGGAAAGGCTTCGTGGCGGCCTTGATGAGATTGGTCGGTTGAACACTTCTTGTCCATTAGGACTCCATGCAGACGGTATGTGCTCGTGCGAGTCATTCCCAATGGCTGAGGAATCTAGCACTCGATCAAGTATTTCAAGAATAGTCATGCTGGCTGAAGCTCTTTTTGAGGTTTTAGATGAAATCCATCGGCAACCTGGATCCCAGTCCCTATCCACCTCACTCCCTGCACCTGAATCAGTTGTGGACTCTTTCCCTCTGAAGTCTCACAAGAAGGTTGATGCAGCTGATGGTGGCAGTGATGCTGAACAATGTTACATATGCCTGGCGGAGTATGAAGATGGGGACCAAATACGAGTTCTTCCTTGCAAGCATGAATATCACATGTCGTGTGTCGATAAGTGGCTGAAGGAAATACATGGTGTATGTCCTCTGTGTCGCAGCAATGTTTGTGGAGGGTTAACAGAGTTGTCAACTGACTCAGAAGTGCAGTCTCGGTGA 1638 0.4451 MGSTSSRLGSRSSSSSTQRVNNNHRFRFSSFLCGASTSRSTSQLEGHQYEELQVDPARDFDDQIQKLAGESTLSSAEEVRFSCCAQAESSTSTNMGTGFRENATVEGSFGNAATSSQRNCLSEQKELVPPYRVSAGHSHPESYSDSNNTASTSLVEQKSSDPVSLSVNDSANKDRINNVDDPVLSGVSQISHETARPRSPISQEYGNSSSGEISVEINTDAGISIHSSSIPVSQASNTLPASQVPEDGARHETLPSGLGILVSNREIVHGNDGLFQVDVVAISSNILSGSNADADDHDARRNSRRLFWDAFSQRSSRRLGDSPTIVFSSGGADDLGSQDRWHVDFDEDLSNYGVGGVSGHRGSRIHRLNERVRNSRSEIWERLRGGLDEIGRLNTSCPLGLHADGMCSCESFPMAEESSTRSSISRIVMLAEALFEVLDEIHRQPGSQSLSTSLPAPESVVDSFPLKSHKKVDAADGGSDAEQCYICLAEYEDGDQIRVLPCKHEYHMSCVDKWLKEIHGVCPLCRSNVCGGLTELSTDSEVQSR 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00917 545 MobiDBLite consensus disorder prediction 1 21 - -
Mepo1g00917 545 Pfam Ring finger domain 483 526 IPR001841 -
Mepo1g00917 545 MobiDBLite consensus disorder prediction 139 173 - -
Mepo1g00917 545 FunFam Putative RING zinc finger domain superfamily protein 451 531 - -
Mepo1g00917 545 SMART ring_2 484 525 IPR001841 -
Mepo1g00917 545 SUPERFAMILY RING/U-box 471 529 - -
Mepo1g00917 545 ProSiteProfiles Zinc finger RING-type profile. 484 526 IPR001841 -
Mepo1g00917 545 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 443 530 IPR013083 -
Mepo1g00917 545 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 1 544 - -
Mepo1g00917 545 MobiDBLite consensus disorder prediction 182 209 - -
Mepo1g00917 545 MobiDBLite consensus disorder prediction 132 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00917 Mepo-Chr1 8774622 8778692 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00917 396 530 C3H Transcription Factor Family AT5G45290 50.658 2.26e-38 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00917 - - cam:101493889 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00917 1 8774622 8778692 Mepo1g00917 1 8774622 8778692 ECH