Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00911 ATGGCATCTTGCATGAAACCACAAAGCATCAATGAAGATGATTCTGTCATACTCTTTTCAACTTCTAATTCTTCCATTAGTCCTTCTTCCTCTTCTTTCCATCATTCCCCACCACCAACTTCATGCAAACTTTCTATTAAAAACCTCACCTATACTTTGCACCCTTATAAAACCATTCCCTTTTCATTTCATAACCTTACTCAAAAACCACATCCTGTAAACATACTCAAATCTGTTTCTTTTGTTGCCAGAACTTCCGAAATTGTCGCAGTTGTCGGACCTAGTGGCACAGGCAAATCCACCCTTCTTAGAATAATCGCGGGGCGAATAAAAGACAAAGATTTCATTCCCAAAACTATCTCAATCAATGATCACCCTATGAGTACTCCATCTCAGTTAAGAAAAATATGTGGCTTTGTTTCACAAGAAGACAACTTGCTTCCACTTCTAACAGTGAAAGAAACTTTGTTATTTGGTGCAAAGTTTAGGCTAAAAGAAATGACACCAAAAGAAAGAGAATTAAGAGTAGAAAACTTAATGCAAGAGTTAGGACTTTTTCATGTAGCACATAGTTTTGTTGGTGATGAAGAAAATAGAGGGGTCTCTGGTGGTGAAAGAAAAAGGGTATCAATTGGTGTTGATATGATTCATAATCCACCAATTTTAGTCTTGGATGAACCAACATCAGGACTTGATAGTACCTCAGCTCTTCATGTTATTGAGCTTCTTTCTTCAATGGTTAGATCAAAGCAAAGGATAGTGATACTTTCAATTCATCAACCTAGTTATAGAATATTGCAATATATTTCTAAGTTCTTGATCCTTTCTCATGGTTCAGTAGTTCATAATGGTAGTTTGGAATCACTAGAGGAAAGAATATCTAGTTTGGGATTTCAAATTCCATTGCAACTTAATGCCCTTGAATTTTCAATGGAAATTATACAAAGTTTAGAAGATAATTCTAGTAGTTCCATCATCCACGAAAACGAAACTTCTTTTCCAAGTTCCATGTGGGCGCTAGAGGAAGAAAATATTGGAAGTGAAGTTTTCCAATCACAATATGAAAAGGAAAGTTTTGGATATCTTTGTTATGTAAACATGATGGAGATACTATTTCTGTGTTCAAGATTTTGGAAGATTATTTATAGAACAAAGCAACTTTTTTTAGCTAGAACAATGCAAGCATTGGTTGGTGGATTTGGATTAGCAAGTGTTTACATAAAAGTAAGAAAAGATGAAGACGGAATTGCAGAAAGATTAGGTCTGTTTGCATTTAGTCTCAGTTTTCTCTTGTCTTCAACAGTTGAAGCACTTCCAATATATCTTCAGGAGAGAACTGTTCTAATGAAAGAAGCATCAAGAGGAGCTTACAGAATCTCTTCTTACTTGATAGCCAACACTTTTGTTTTTCTTCCTTTTTTGTTTGCAGTATCTTTACTTTTTGCAGTTCCTGTTTATTGGATTGTTGGACTCAATCCTTCACTCAGTGCCTTCACTTTCTTCACTTTTGTTGTTTGGCTCATTGTGCTGATGGCAAGTTCTTTAGTTCTCTTTTTGAGTTCTGTGTCTCCTGATTTCATTTCAGGAAATTCACTCATATGCACAGTTCTTGGAGCCTTTTTTCTATTCTCTGGATACTTCATTCCAAAAGAGAGTATTCCAAAATATTGGCTTTTTATGTATTATGTGTCACTTTATAGGTACCCTTTGGATGCATTACTCACAAATGAGTATTGGAATGTTGGAAATGAGTGTTTCTCACAAGGCTCTTCTTCAATGTGTTTGGTTACTGGATTTGATGTCTTGAAGAGTAGAGGAATTGAAAAGGATAATAGGTGGATGAATGTGGGGATAATGTTTGGATTCTTTGTGTTCTATCGTTTGCTTTGTTGGGTCATACTTGCTAGAAAGGCCTCCAAGACTACAATATAA 1932 0.3551 MASCMKPQSINEDDSVILFSTSNSSISPSSSSFHHSPPPTSCKLSIKNLTYTLHPYKTIPFSFHNLTQKPHPVNILKSVSFVARTSEIVAVVGPSGTGKSTLLRIIAGRIKDKDFIPKTISINDHPMSTPSQLRKICGFVSQEDNLLPLLTVKETLLFGAKFRLKEMTPKERELRVENLMQELGLFHVAHSFVGDEENRGVSGGERKRVSIGVDMIHNPPILVLDEPTSGLDSTSALHVIELLSSMVRSKQRIVILSIHQPSYRILQYISKFLILSHGSVVHNGSLESLEERISSLGFQIPLQLNALEFSMEIIQSLEDNSSSSIIHENETSFPSSMWALEEENIGSEVFQSQYEKESFGYLCYVNMMEILFLCSRFWKIIYRTKQLFLARTMQALVGGFGLASVYIKVRKDEDGIAERLGLFAFSLSFLLSSTVEALPIYLQERTVLMKEASRGAYRISSYLIANTFVFLPFLFAVSLLFAVPVYWIVGLNPSLSAFTFFTFVVWLIVLMASSLVLFLSSVSPDFISGNSLICTVLGAFFLFSGYFIPKESIPKYWLFMYYVSLYRYPLDALLTNEYWNVGNECFSQGSSSMCLVTGFDVLKSRGIEKDNRWMNVGIMFGFFVFYRLLCWVILARKASKTTI 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00911 643 Pfam ABC-2 type transporter 259 342 IPR043926 GO:0140359
Mepo1g00911 643 Gene3D - 61 310 IPR027417 -
Mepo1g00911 643 SMART AAA_5 85 287 IPR003593 GO:0016887
Mepo1g00911 643 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 295 IPR027417 -
Mepo1g00911 643 FunFam ABC transporter G family member 23 67 300 - -
Mepo1g00911 643 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 23 628 - -
Mepo1g00911 643 ProSitePatterns ABC transporters family signature. 201 215 IPR017871 GO:0005524|GO:0016887
Mepo1g00911 643 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 61 302 IPR003439 GO:0005524
Mepo1g00911 643 Pfam ABC transporter 76 229 IPR003439 GO:0005524
Mepo1g00911 643 Pfam ABC-2 type transporter 370 578 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00911 Mepo-Chr1 8729434 8731365 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00911 57 289 Calmodulin-binding Proteins AT2G36910 29.218 6.58e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00911 K05681 - gmx:100783883 998.423