Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00910 ATGGCTTTTCACGAGCATCTCCAACAAGAAATAGCTTTCCAGCGTTTCACAGAAGAGGAAGATGAAGAAAGAGCATCTTGGCTCAACAACAACAGTGTAAACGCACGTCAACAGAATTTCATGCAAATAGAACCAGAAAGGAGGGAAAAAAGCATGGATCGGAATGACAACAATTGCGAAACGGAAGAATTAAGGGAATACAAAGCAGAGATATTAGGACATCCACTGTATGATCAATTATTATCTGCTCATGTTTCGTGTCTCAGAATTGCAACACCGGTTGATCAGCTTCCAAGGATTGATGCTCAACTTCAACAGGCACAACGTGTTCTTCAAAAATATTCTTCTGTTGGAATTGGAAATATGGATCCCAAGGAGCTTGATCACTTTATGACACATTATGTTCTTTTGCTGTGTGCATTCAAAGAACAGTTGCAACAACATGTCCGTGTTCATGCCATGGAGGCTGTAATGGCTTGTTGGGATCTTGAGCAGTCTCTGCAAAGCTTGACAGGTGTATCTTCGGGTGAAGGAACAGGAGCAACAATGTCAGACGATGAAGATGAGCAGGCAGAGAGTAACGCTAGGTTATACAACGAAGGAAGCAGCCTTGACGGCGTTGATACTCTTGGCTTTGGTCCTCTTATCCCCACCGAGACTGAAAGATCTTTGATGGAGCGAGTTAGGCTTGAGTTGAAGCATGAGCTCAAACAAGGTTACAAGGAGAAGATTGTAGATGTAAGAGAAGAAATTCTACGAAAGAGAAGAGCTGGGAAACTCCCTGGGGATACCACATCTCTTTTGAAAGCTTGGTGGCAGTCACATTCTAAATGGCCCTATCCAACTGAGGAAGACAAGGCTAGATTGGTGCAGGAAACAGGCTTGCAATTGAAGCAAATAAACAACTGGTTTATCAATCAAAGGAAAAGGAATTGGCATGCTAACTCCCCATCCTCTAGTAGCTCCAAAACCAAGCGCAAGAGTGCAGGCGATAGCAGTAACCAGAGCTTCATGTGA 1017 0.4346 MAFHEHLQQEIAFQRFTEEEDEERASWLNNNSVNARQQNFMQIEPERREKSMDRNDNNCETEELREYKAEILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQQAQRVLQKYSSVGIGNMDPKELDHFMTHYVLLLCAFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSSGEGTGATMSDDEDEQAESNARLYNEGSSLDGVDTLGFGPLIPTETERSLMERVRLELKHELKQGYKEKIVDVREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHANSPSSSSSKTKRKSAGDSSNQSFM 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00910 338 Pfam KNOX2 domain 124 171 IPR005541 GO:0003677|GO:0005634
Mepo1g00910 338 CDD homeodomain 254 313 IPR001356 GO:0003677
Mepo1g00910 338 Pfam Homeobox KN domain 271 310 IPR008422 GO:0003677|GO:0006355
Mepo1g00910 338 SMART ELK_2 231 252 IPR005539 GO:0003677
Mepo1g00910 338 SMART KNOX1_2 65 109 IPR005540 GO:0003677|GO:0005634
Mepo1g00910 338 ProSiteProfiles 'Homeobox' domain profile. 251 314 IPR001356 GO:0003677
Mepo1g00910 338 SMART KNOX2_2 116 172 IPR005541 GO:0003677|GO:0005634
Mepo1g00910 338 SUPERFAMILY Homeodomain-like 253 318 IPR009057 -
Mepo1g00910 338 Gene3D - 250 329 - -
Mepo1g00910 338 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 76 327 - -
Mepo1g00910 338 Pfam ELK domain 231 252 IPR005539 GO:0003677
Mepo1g00910 338 FunFam homeobox protein knotted-1-like 3 isoform X1 252 313 - -
Mepo1g00910 338 MobiDBLite consensus disorder prediction 172 193 - -
Mepo1g00910 338 SMART HOX_1 253 318 IPR001356 GO:0003677
Mepo1g00910 338 MobiDBLite consensus disorder prediction 311 338 - -
Mepo1g00910 338 ProSiteProfiles ELK domain profile. 231 251 IPR005539 GO:0003677
Mepo1g00910 338 Pfam KNOX1 domain 67 107 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00910 Mepo-Chr1 8723089 8729055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00910 49 335 Homeobox Transcription Factor Family AT5G11060 76.370 4.01e-159 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Mepo1g00910 KNOX2 4.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00910 - - gmx:100803673 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00910 1 8723089 8729055 Mepo1g00910 1 8723089 8729055 ECH