Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00899 ATGCCGTACGGTGAATCCTCCACCGTTGCTTCCGTTCAGTTTCCGCCGGAGACCTCCGATCATGGAAAAATTCCTTCCCTTGACGTTGAGTCTTCTCTAGTCAAAAAAGATCCCACCAAAATTGCTAGAAAGTACCAATTGGATTTATGCAAAAAAGCTATGGAGGAAAATACTATTGTTTATTTGGGAACAGGATGTGGGAAGACACACATTGCTGTGTTGCTTATGCATGAGATGAGATATTTGATCAAGAAGCCGAACAAGGATGTATGCGTCTTTCTTGCACCTACCATTGCTCTAGTTCATCAGCAAGCAAAGGTGATATCTGACTCTACTGATTTTGAAGTTGGAACTTACTGTGGGAGTTCCAAGGGCACAAAATCTCATCAACACTGGGAGGAGGAGATTGAACAGAATGAGGTTCTTGTCATGACCCCACAAATATTACTTCACAACTTATCTCATTGTTTCATCAAGATGGAGATGATTGCACTTTTGATTTTCGATGAATGCCATCATGCTCAAGTCAAAAGCAGTCATCCTTATGCAGAAATCATGAAAGTCTTCTACAAAAATAATTCCACAAAGGTTCCCCGTATATTTGGCATGACTGCTTCCCCTGTTGTAGGAAAAGGTGCTTCTACTGAAGCAAATCTACCAAAAAGCATTAATAGTCTTGAACAAATGCTTGATGCTAAGGTATACTCAGTTGACGATGAGGCATTGCAATCTTTTGTGACCAGTCCTGCAGTTCGTATATACCATTATAGTTCGACTGCAAGTATGGAAACTAGCTTGTACTGTAAAATTGAGGAGATTAAATGCCAGTGCATAGAAACCCTTGGTAGGAGTATAGAAGATCACCAGAAGCGGATGAGCACAAAGAAACTTCTCAACAGGGTGCATGAGAATGTGGTCTTTTGTCTTAGAAGTCTTGGCATTTGGGGAGCATTGCAGGCTACCCGTATTCTTTTGAGCGGTGATCATTCTGAGAGGCATGCATTAGTTGAGGCAGAAGGAATTTCAAGTGACGAGTCTGCATGTGATAAATATCTTGCAAAGGCTGCTGACCTATTTGCTTCCAAATCCATGACAGGTGACAGCGTATCTGATCCATCTTCTTTGGAAATATTAAAAGAGCCCTTTCTCTCTGCAAAGCTACTACGCCTCATTGGGATACTGACCAGTTTCAGGTTGCAGCAGAACATGAAGTGTATAGTTTTTGTCAACAGAATTGTGACTGCAAGATCTCTGTCTTACATACTACAGAAGCTCGAGCTTCTAAGGCAATGGAAGAGCGGTTTTCTTGTAGGAGTCCATTCTGGAGCAAAGATTATGTCACGGAAGACCATGAGTGCAATTGTTGAGAAGTTTCGCTCTGGAGAGCTGAATTTACTGGTTGCCACCAGTGTGGGGGAAGAAGGACTTGATATTCAGACATGTTGCCTTGTCATACGGTTCGATCTTCCAGAAACTGTTGCCAGTTTTATACAGTCAAGAGGCCGTGCACGCATGCCTCGTTCAGAATATGCATTTTTGGTTGACAGTGGAAATGAGAAGGAATTAGCCATTATTGATGGTTTTGAGAAAGATGAGTTCCGAATGAATACAGAAATTACTGACAGAACATCCAGTGAGACATACGACATGCCTGTAGAAAAAACATTCAGAGTTGATTCATCCGGTGCCTCAGTCAGTTCGGCATATAGTATCTCATTGCTCCACCAGTATTGTTCAAAGCTTCCACATGATGAGTTTTTTGATCCCCGGCCAAATTTCTTTTACTTTGATGATTTAGGAGGGACTGTCTGCCAAATAACTTTGCCTTCCAATGCTCCTATACACCAAATTGTTGGTACGCCACAATTGTCTATGGAAGCTGCGAAAAGAGATGCTTGCCTGAAAGTAATTGAAGAACTGCATAAATTAGGTGCTTTGAATGATTGTCTTTTGCCAAGGCAAAATGATGCAGAGCCAGAAAAGGTTTTGGATTCTTCTGATTCACATGAGTATGCAGATGACATTTCAAGAGGAGAATTATATGAGATGCGAGTTCCTTCTGTCTTTGGACAGTCATGGAAACATGAGGAGAAAACTGTCCGTCTCAACTCTTACTACATTAAATTTTCCCCCACTCCAGAGGATAGGGTCTATAAAAATTTCGGTTTATTCATCATGACTCGTCTTCCAATGGAGGCAGAGGAACTGAAACTTGATCTTCATCTTGCTCACGGTAGATCCGTGATGACAAAATTTATTCCATTTGGAGTTGTAGAATTCAACAAAGATGAGATTAAGATGGCGGAGAATTTTCAAGAAATGTTCCTCAAAATTATTCTCGATAGATTAGAATTTGTTTCCAAGTTTGTAGAATTGGGTGCTAAATCTCACACAAGCACATCGACCTTCTACCTTTTGCTTCCAGTCATATTGAAAGAATATGATGATGTGATGAAAGTAGACTGGAAGACAGTGAAGAGATGCCTTAGTTCACCAATTTTCAGGCATCCAGAAGTTACTTCAGATAAAATCGTTACCTCTATGGATAATCATCTGCTACTTGCCAATGGTTACAGAAGTATTACAGATGTTGAGAATAGTTTAGTGTATGTTCCACATACTAAGTTATTTTTTTTTGTCACAAATGTTATCTATGAAAAGAATGGATTCAGTCTTCATAAAAATTCAGAAACTTCAAGCTTCGTGGACCACTTAAATGAAAAGTTTTCCATTGATCTCAAACGCCCTGAACAACCACTTCTGCATGCAAAACAACTCTTCAATTTGCACAACCTACTACACGATCGAAAGAATGTGGATGATGCTGTCACAGAACCACGTGAGCTGGAGGAACACTTTGTTTATTTTCCTCCTGAGCTATGCGAACTGAAAATAGCAGGCTTTTCAAAGGATATTGGCAGTTCCATATCTTTGCTACCTTCAATTATGCATCGTCTTGGAAACTTGCTGGTTGCCATTGAACTGAGGAACCATCTATCTTCCTCCTTCCCAGAGGCAGCTGAAATTAGTGCCCATAGGGTTCTAGAGGCTCTCACCACCGAGCAGTGTCAGGAGCGCTTTTCCCTTGAAAGGCTCGAAGTGCTCGGTGACGCTTTCCTTAAATTTGCTGTTGCACGCCATTTTTTTCTGTTGCACGACAGCTTTCATGAAGGAGACCTTACCAGCAAGCGTTCCAATATTGTAAATAATTCCAATTTGCTCAAGTTGGCTATTAAGCGCAATTTGCAGGTCTATATACGTGACCAGGCACTTGATCCCATCCAGTTCTATGCATTAGGCCGTCCTTGCCCAAGAGTTTGTACTGAGGAAACTGAAGACAGCATCCACTTATGTTTAGATTCTGGTGAGGAGAAAAGGAGTGCAACTCAAATCCATTGTAATAAAAATCACCATTGGTTGCATAGGAAAACAATTTCTGATGTGGTTGAAGCTCTTGTGGGAGCATTCATAGTTGACAGTGGATTTAAAGCTGCAATTGCCTTTCTTACATGGATTGGCATACAAGTAAATTTTGAAGCCTCGCAAGTTGTTAATATTTGCACTGGAAGTGTTGGCTATTTTCCTCTTTCTAGTGAAGTAGACATTCCCTCCCTTGAAGGAAAATTAGGGCATCACTTTGTTCATAAGGGTCTACTTCTTCAGGCATTTGTACATCCTTCGTATAATAAGCACGGAGGAGGCTGTTATCAGAGACTGGAGTTTCTTGGAGATGCTGTCTTGGATTATTTGATTACGTCATATCTATACTCTGCTTATCCCAAACTAAAGCCTGGCCAACTGACAGATCTGAGATCGTTGTCTGTCAATAATAAGGCATTTGCCTGTGTGGCAGTAGATCGCTGTTTTCATGAATTTCTTCTATGTGGTTCAAGTGCTCTGACTGGGGCAATAAAAAAGTATGCGGACTATATTACAAGACCTGTATCAGACCGTGACACAAATGGAGGGACAAATAGTCCTAAGGCCTTAGGTGATTTGGTGGAATCTTGTATTGGTGCCGTTCTTCTTGATTCAGGATTTGATTTGAACAAAGTTTGGAAGATTATGACATCATTCTTGGACCCAATCATGAAATTTTCATCAAGTTTACAGCTTAGTCCTGTTAGGGATTTGCAAGAACTTTGCCAATCTCATAATTTGGAATTGGAGCTTTTGACATCCAAACTAGCTAAAACTTTTTCAGTTGAAGCTAAAGTGACTGGGGACGGTGTATATGAAAAAGTTTCTGTGACCAGCCATAATAAAAAAGAAGCTGCTAAAGTTGCTTCACAACGACTATTTTCAAAGTTGAAGGCTCAAGGCTTGAAACTGAGGACAAAAACTTTGGAAGACGTTCTGAAATCAACATATAAGAGGGAACCAAAACTCATTGGCTTTGATGAAACTCCCATTGATGTAACATATACTACTACCATCGAACAAGTAATGATTAATGGAGACCTATGCAGCAATTCTAATCCAGAAATCTGCCCTATTCGGGATGTATCGGATGCATCCTTCTCGTGTGTTATACGTGTCGCGCAACGGCTTCAATCTTCTTCTAAGGGAAAGCTTAGTGAAACCGTTCAAAATCGTGATTGTGGCAGTGACTTAGCAAGGACAGCAAGATCGCGATTGTATGAATTATGTGCTGCTAATTACTGGAAACCTCCTTCATTTGACTGCTGCAAGGAAGAGGGACCGGACCACCTTAAGTTATTCACTTGCATGGTGGCAATGGAGATAGAAGAGGCCTCAAATATGATTATCGAGTTTATTGGGGAACCTCTACCAAAGAAGAAAGATTCAGCGGATAGTGCAGCTGAGGCTGCATTTTGGTACCTGAAAGAGAAAGGTTACCTGCATAATGCTAAGGGTAACTGA 4884 0.4081 MPYGESSTVASVQFPPETSDHGKIPSLDVESSLVKKDPTKIARKYQLDLCKKAMEENTIVYLGTGCGKTHIAVLLMHEMRYLIKKPNKDVCVFLAPTIALVHQQAKVISDSTDFEVGTYCGSSKGTKSHQHWEEEIEQNEVLVMTPQILLHNLSHCFIKMEMIALLIFDECHHAQVKSSHPYAEIMKVFYKNNSTKVPRIFGMTASPVVGKGASTEANLPKSINSLEQMLDAKVYSVDDEALQSFVTSPAVRIYHYSSTASMETSLYCKIEEIKCQCIETLGRSIEDHQKRMSTKKLLNRVHENVVFCLRSLGIWGALQATRILLSGDHSERHALVEAEGISSDESACDKYLAKAADLFASKSMTGDSVSDPSSLEILKEPFLSAKLLRLIGILTSFRLQQNMKCIVFVNRIVTARSLSYILQKLELLRQWKSGFLVGVHSGAKIMSRKTMSAIVEKFRSGELNLLVATSVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPRSEYAFLVDSGNEKELAIIDGFEKDEFRMNTEITDRTSSETYDMPVEKTFRVDSSGASVSSAYSISLLHQYCSKLPHDEFFDPRPNFFYFDDLGGTVCQITLPSNAPIHQIVGTPQLSMEAAKRDACLKVIEELHKLGALNDCLLPRQNDAEPEKVLDSSDSHEYADDISRGELYEMRVPSVFGQSWKHEEKTVRLNSYYIKFSPTPEDRVYKNFGLFIMTRLPMEAEELKLDLHLAHGRSVMTKFIPFGVVEFNKDEIKMAENFQEMFLKIILDRLEFVSKFVELGAKSHTSTSTFYLLLPVILKEYDDVMKVDWKTVKRCLSSPIFRHPEVTSDKIVTSMDNHLLLANGYRSITDVENSLVYVPHTKLFFFVTNVIYEKNGFSLHKNSETSSFVDHLNEKFSIDLKRPEQPLLHAKQLFNLHNLLHDRKNVDDAVTEPRELEEHFVYFPPELCELKIAGFSKDIGSSISLLPSIMHRLGNLLVAIELRNHLSSSFPEAAEISAHRVLEALTTEQCQERFSLERLEVLGDAFLKFAVARHFFLLHDSFHEGDLTSKRSNIVNNSNLLKLAIKRNLQVYIRDQALDPIQFYALGRPCPRVCTEETEDSIHLCLDSGEEKRSATQIHCNKNHHWLHRKTISDVVEALVGAFIVDSGFKAAIAFLTWIGIQVNFEASQVVNICTGSVGYFPLSSEVDIPSLEGKLGHHFVHKGLLLQAFVHPSYNKHGGGCYQRLEFLGDAVLDYLITSYLYSAYPKLKPGQLTDLRSLSVNNKAFACVAVDRCFHEFLLCGSSALTGAIKKYADYITRPVSDRDTNGGTNSPKALGDLVESCIGAVLLDSGFDLNKVWKIMTSFLDPIMKFSSSLQLSPVRDLQELCQSHNLELELLTSKLAKTFSVEAKVTGDGVYEKVSVTSHNKKEAAKVASQRLFSKLKAQGLKLRTKTLEDVLKSTYKREPKLIGFDETPIDVTYTTTIEQVMINGDLCSNSNPEICPIRDVSDASFSCVIRVAQRLQSSSKGKLSETVQNRDCGSDLARTARSRLYELCAANYWKPPSFDCCKEEGPDHLKLFTCMVAMEIEEASNMIIEFIGEPLPKKKDSADSAAEAAFWYLKEKGYLHNAKGN 1627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00899 1627 ProSiteProfiles PAZ domain profile. 863 965 IPR003100 GO:0005515
Mepo1g00899 1627 MobiDBLite consensus disorder prediction 1 15 - -
Mepo1g00899 1627 Pfam PAZ domain 863 986 IPR003100 GO:0005515
Mepo1g00899 1627 FunFam Endoribonuclease dicer-like 1 377 540 - -
Mepo1g00899 1627 Pfam Ribonuclease III domain 1237 1346 IPR000999 GO:0004525|GO:0006396
Mepo1g00899 1627 Pfam Ribonuclease III domain 1030 1161 IPR000999 GO:0004525|GO:0006396
Mepo1g00899 1627 Gene3D - 42 296 IPR027417 -
Mepo1g00899 1627 Gene3D - 1365 1441 - -
Mepo1g00899 1627 SMART riboneu5 1012 1181 IPR000999 GO:0004525|GO:0006396
Mepo1g00899 1627 SMART riboneu5 1217 1369 IPR000999 GO:0004525|GO:0006396
Mepo1g00899 1627 Gene3D Dicer dimerisation domain 566 662 IPR038248 -
Mepo1g00899 1627 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 49 225 IPR014001 -
Mepo1g00899 1627 Pfam double strand RNA binding domain from DEAD END PROTEIN 1 1541 1616 - -
Mepo1g00899 1627 SUPERFAMILY dsRNA-binding domain-like 1541 1620 - -
Mepo1g00899 1627 CDD DEXHc_dicer 40 239 - -
Mepo1g00899 1627 ProSitePatterns Ribonuclease III family signature. 1237 1245 IPR000999 GO:0004525|GO:0006396
Mepo1g00899 1627 Gene3D paz domain 858 963 - -
Mepo1g00899 1627 Coils Coil 1375 1395 - -
Mepo1g00899 1627 SMART DRBM_3 1374 1438 IPR014720 -
Mepo1g00899 1627 SMART DRBM_3 1542 1616 IPR014720 -
Mepo1g00899 1627 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1373 1439 IPR014720 -
Mepo1g00899 1627 FunFam Endoribonuclease dicer-like protein 37 276 - -
Mepo1g00899 1627 ProSiteProfiles Ribonuclease III family domain profile. 979 1161 IPR000999 GO:0004525|GO:0006396
Mepo1g00899 1627 CDD RIBOc 1218 1368 IPR000999 GO:0004525|GO:0006396
Mepo1g00899 1627 Gene3D Ribonuclease III domain 1197 1364 IPR036389 GO:0004525|GO:0006396
Mepo1g00899 1627 Gene3D Ribonuclease III domain 1008 1172 IPR036389 GO:0004525|GO:0006396
Mepo1g00899 1627 Pfam Dicer dimerisation domain 570 655 - -
Mepo1g00899 1627 SUPERFAMILY RNase III domain-like 1201 1365 IPR036389 GO:0004525|GO:0006396
Mepo1g00899 1627 ProSiteProfiles Dicer double-stranded RNA-binding fold domain profile. 570 660 IPR005034 GO:0016891
Mepo1g00899 1627 Pfam Helicase conserved C-terminal domain 392 504 IPR001650 -
Mepo1g00899 1627 SMART helicmild6 423 506 IPR001650 -
Mepo1g00899 1627 Gene3D - 1548 1617 - -
Mepo1g00899 1627 SMART PAZ_2_a_3 838 991 IPR003100 GO:0005515
Mepo1g00899 1627 Gene3D - 379 540 IPR027417 -
Mepo1g00899 1627 CDD RIBOc 1015 1171 IPR000999 GO:0004525|GO:0006396
Mepo1g00899 1627 SMART ultradead3 38 240 IPR014001 -
Mepo1g00899 1627 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 386 543 IPR001650 -
Mepo1g00899 1627 SUPERFAMILY PAZ domain 864 963 IPR036085 GO:0005515
Mepo1g00899 1627 MobiDBLite consensus disorder prediction 1 26 - -
Mepo1g00899 1627 Pfam Type III restriction enzyme, res subunit 52 207 IPR006935 GO:0003677|GO:0005524|GO:0016787
Mepo1g00899 1627 FunFam Endoribonuclease dicer-like 1 1196 1367 - -
Mepo1g00899 1627 ProSiteProfiles Ribonuclease III family domain profile. 1202 1346 IPR000999 GO:0004525|GO:0006396
Mepo1g00899 1627 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 521 IPR027417 -
Mepo1g00899 1627 FunFam Endoribonuclease dicer-like 1 565 661 - -
Mepo1g00899 1627 SUPERFAMILY RNase III domain-like 1012 1175 IPR036389 GO:0004525|GO:0006396
Mepo1g00899 1627 PANTHER DICER-RELATED 56 1442 - -
Mepo1g00899 1627 SUPERFAMILY dsRNA-binding domain-like 1328 1438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00899 Mepo-Chr1 8604067 8618212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00899 404 536 Eukaryotic Initiation Factors Gene Family AT3G19760 31.884 1.49e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00899 K11592 - gmx:100797277 2449.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00899 1 8604067 8618212 Mepo1g00899 1 8604067 8618212 ECH