Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00886 ATGAATCAATTCCGCCAATCATTGGAGATACGAAGACAATTACTTTTGAAAAAAACCCTAGTGATGGACAATATTCCCTGTGAAATTGACGAGGGATTGTTTTTAGGTTCGGTTGAATCTGCAACCAACAAGGTTGGTTTGAAAAATGTGAATGTTACTCACATTTTGACGGTGGCTTGGAAACTTCCACCTGCACATCCTGCAGATTTCATCTATAAAATTCTATATGTTGCTGACAGAGAAACTACCAACTTAAAACAACACTTCAATGAGTGTTTTGATTTTATCGACGAAGCCAAAAGAAATGGTGGACATGTTTTGGTTCACTGTAAAATGGGAATATCCAGAAGTGTGACTATCGTTGTGGCATATTTGATGAAGTCTCGTGGAATGAGCTTATCTGAAGCTCTGCAATATGTAAAGAACAAAAGATCACAAGCAGCTCCAAATCGTGGTTTCATTCGTCAGCTGGGAGACTTTGAGAAATCTCTTGAAGGGTTTCATGGCGGAGTTGGTGGAAGGCTGCGGGTGGAGGGGACAGCGACGGAGACCCCTTGCTGGGAAGAAGATTTGGGGCCCGGACAGGTTGTGGATATTGAGGAGAATGAGATGGAGGAGAATAAGAAGAAACGAAGAAAAACACCGAATGAACACGAAAAAAGAAGAACGAATGAACACGAAGAATAA 687 0.4134 MNQFRQSLEIRRQLLLKKTLVMDNIPCEIDEGLFLGSVESATNKVGLKNVNVTHILTVAWKLPPAHPADFIYKILYVADRETTNLKQHFNECFDFIDEAKRNGGHVLVHCKMGISRSVTIVVAYLMKSRGMSLSEALQYVKNKRSQAAPNRGFIRQLGDFEKSLEGFHGGVGGRLRVEGTATETPCWEEDLGPGQVVDIEENEMEENKKKRRKTPNEHEKRRTNEHEE 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00886 228 Pfam Dual specificity phosphatase, catalytic domain 33 162 IPR000340 GO:0008138|GO:0016311
Mepo1g00886 228 MobiDBLite consensus disorder prediction 185 228 - -
Mepo1g00886 228 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 87 144 IPR000387 GO:0016311|GO:0016791
Mepo1g00886 228 Gene3D Protein tyrosine phosphatase superfamily 19 168 IPR029021 -
Mepo1g00886 228 ProSiteProfiles Dual specificity protein phosphatase domain profile. 25 166 IPR020422 GO:0006470|GO:0008138
Mepo1g00886 228 FunFam Dual specificity phosphatase 12 27 168 - -
Mepo1g00886 228 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 22 165 IPR029021 -
Mepo1g00886 228 CDD DSP 26 157 - -
Mepo1g00886 228 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 23 220 - -
Mepo1g00886 228 SMART dsp_5 25 163 IPR020422 GO:0006470|GO:0008138
Mepo1g00886 228 MobiDBLite consensus disorder prediction 201 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00886 Mepo-Chr1 8507528 8510485 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00886 28 166 Protein tyrosine phosphatase (PTP) family AT3G06110 58.273 1.37e-56 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00886 - - jre:109010483 213.001