Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00885 ATGGCTACAACATCAGAAGCTATGAATCAATTCGACGAATCGATGAAGAAACAAATTGCATTAATTTTGAAGGTTGTGCTTTTGAATAAATCCTTGAAAGAGGATAATATTCCCTGCCAAATTGATGAGGGTTTGTTTTTGGGTTCAGTTGGTTCTGCTACGAACAAGGTTGGTTTGAAAAATCTCAATGTTACTCACATTTTGACCGTCGCTGGGAAACTTGCACCTGCCCATCCAGCCGATTTCGTCTATAAAATTATAGATGTTGCTGACAAAGAGGATACCAACTTAAAACAACACTTCAAAGAGTGTTTTGATTTTATTGATGAAGCCAAAAGAAATGGTGGAAGTGTTTTGGTTCATTGTTATGCTGGAAGATCGAGGAGTGTGACTATCATTGTGGCGTATCTGATGAAGTCTCGGGGAATGAGCTTATCTGAAGCTCTGAAACATGTAAAAAGCAAAAGACCACAAGCAGCTCCAAATCGTGGTTTCATTCGTCAGCTGGAAGACTTTGAGAAATCTCTTCAAGATATCGAAGTGTCTGGGTAG 552 0.3913 MATTSEAMNQFDESMKKQIALILKVVLLNKSLKEDNIPCQIDEGLFLGSVGSATNKVGLKNLNVTHILTVAGKLAPAHPADFVYKIIDVADKEDTNLKQHFKECFDFIDEAKRNGGSVLVHCYAGRSRSVTIIVAYLMKSRGMSLSEALKHVKSKRPQAAPNRGFIRQLEDFEKSLQDIEVSG 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00885 183 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 35 177 IPR029021 -
Mepo1g00885 183 ProSiteProfiles Dual specificity protein phosphatase domain profile. 37 178 IPR020422 GO:0006470|GO:0008138
Mepo1g00885 183 Pfam Dual specificity phosphatase, catalytic domain 45 174 IPR000340 GO:0008138|GO:0016311
Mepo1g00885 183 Gene3D Protein tyrosine phosphatase superfamily 39 182 IPR029021 -
Mepo1g00885 183 FunFam Dual specificity phosphatase 12 39 183 - -
Mepo1g00885 183 CDD DSP 38 171 - -
Mepo1g00885 183 SMART dsp_5 37 175 IPR020422 GO:0006470|GO:0008138
Mepo1g00885 183 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 99 157 IPR000387 GO:0016311|GO:0016791
Mepo1g00885 183 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 32 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00885 Mepo-Chr1 8460186 8464025 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00885 40 177 Protein tyrosine phosphatase (PTP) family AT3G06110 58.696 6.93e-58 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00885 - - lang:109352945 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00885 1 8460186 8464025 Mepo1g00885 1 8460186 8464025 ECH