Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo1g00883 | ATGGGTGGTTCATGGAGTAATAATAACAGTAATAACAGAAACATAAGTAGAAGAAGACATAGTTACCATGAACACTATCCACCACCTCCTTACTATTATTACTCTTCTCAGCCTCAGCCTTTGATGCCACAGCCACAGCCTCCTCAAGGTTACTTTCCTCCTCCTCATCATCAATACTACTCAAATGGATACACTCCTACCAATTCCATGCTTCCTCAGCCTCACCACCCTTTCTATGCAACAACAAATACTCAACCACTTGATGTAGATGTAAATGTTGTTCAAGCACTTCCACCACCACCTCCATACACTGACCATGAAACTGCAAAGAAGGTAAGGAATGATGTGAATTTGCATAAACACACTCTGCAGCTTTACCAGGATCCCAACAATCCCGATCACCACTTGATTTCCTTTGTTTTTGATGCCCTCTTTCCTGGCAGAATTACAATCTTCTACTTAGCCAGAGAAGAAGAACATCAATGTAGGTTTGTTCCTCTATTTCCCGAAGCGTTTGAGCCAATCACGTTCCCCTTCCAGAAAGGAGTTGGACAGAAATTTTGTCAGCCATCAGGAACAGGCATAGACTTAGGTTTCTTTGAGTTGGAAGATCTTTCAAACCACTCACCTGAAGAAGATGTATTTCCCCTTGTAATATGTGCCGAAACAACCCCTTTGGCAGATCATGAAACTTCTGCTAGTTCCTTAGTAGATGCATCCCCTCACATGCAAATAACTCAAGCTGTCTTGGAGAGAAACAGTGACACTGGTCCTTACCAGGTTAAAGTAGTTAGGCAGATTCTATGGATCGATCAAGTTCGTTATGAGCTCAGAGAGTTATATGGGATTGGTAACTCGACAGCACCTGATTTTGATCGTAATGATCCTGGAAAGGAGTGTGTAATATGCATGACAGAACCAAAGGATACTGCTGTCTTACCTTGCCGACACATGTGTATGTGCAGCGAGTGTGCAAAAGCTTTGCGAGTTCAATCAAACAATTGCCCTATATGCCGCCAACCAATTGAGCAACTAATAGAGATCAAGATAAACAATGATGACCAATGA | 1068 | 0.4223 | MGGSWSNNNSNNRNISRRRHSYHEHYPPPPYYYYSSQPQPLMPQPQPPQGYFPPPHHQYYSNGYTPTNSMLPQPHHPFYATTNTQPLDVDVNVVQALPPPPPYTDHETAKKVRNDVNLHKHTLQLYQDPNNPDHHLISFVFDALFPGRITIFYLAREEEHQCRFVPLFPEAFEPITFPFQKGVGQKFCQPSGTGIDLGFFELEDLSNHSPEEDVFPLVICAETTPLADHETSASSLVDASPHMQITQAVLERNSDTGPYQVKVVRQILWIDQVRYELRELYGIGNSTAPDFDRNDPGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNNCPICRQPIEQLIEIKINNDDQ | 355 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo1g00883 | 355 | PANTHER | MAHOGUNIN | 1 | 349 | IPR045194 | GO:0061630 | |
Mepo1g00883 | 355 | MobiDBLite | consensus disorder prediction | 60 | 83 | - | - | |
Mepo1g00883 | 355 | MobiDBLite | consensus disorder prediction | 21 | 83 | - | - | |
Mepo1g00883 | 355 | SMART | ring_2 | 300 | 338 | IPR001841 | - | |
Mepo1g00883 | 355 | MobiDBLite | consensus disorder prediction | 31 | 54 | - | - | |
Mepo1g00883 | 355 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 285 | 349 | IPR013083 | - | |
Mepo1g00883 | 355 | ProSiteProfiles | Zinc finger RING-type profile. | 300 | 339 | IPR001841 | - | |
Mepo1g00883 | 355 | FunFam | probable E3 ubiquitin-protein ligase LOG2 | 284 | 349 | - | - | |
Mepo1g00883 | 355 | SUPERFAMILY | RING/U-box | 299 | 345 | - | - | |
Mepo1g00883 | 355 | CDD | mRING-HC-C3HC5_MGRN1-like | 298 | 339 | IPR045195 | - | |
Mepo1g00883 | 355 | Pfam | Zinc finger, C3HC4 type (RING finger) | 298 | 344 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo1g00883 | Mepo-Chr1 | 8431654 | 8434038 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo1g00883 | 103 | 355 | C3H Transcription Factor Family | AT3G06140 | 59.449 | 1.69e-99 | 296 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo1g00883 | - | - | psat:127073410 | 542.732 |