Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00876 ATGATGAATATATTTTCAGTGTCGGGTGCTGTTGCTTGCAAGCCCCTAGTGAGTTTCCAACCTCCACTAATGGATAACAATTCATTGTTTCAACAACATCGTAACAAGGAGAAAGTACTTGTAATCATGGGTGCCACCGGAACCGGGAAATCCAAGTTGGCAATAGATTTAGCAACACATTTTCCACCGGCAGAGATTATCAACTCCGACAAAATGCAAGTCTTCAAAGGACTTGACATTACAACAAACAAAGTCACAGAAGAAGAGTGTCGTGGGGTCCACCATCATTTACTTGGAACTGTTGATCCTAATTCAGATTTCACATCCAAGGAGTTTTGTGAACAGGCGACGATGGCTACTAGCTCCATCGTCGCTAGAGATGGTTTACCTATTATAGCAGGTGGATCAAATTCGTACATTGAAGCTTTGGTTAATCATCATCATGAGTTTCATACAAGGTATGAATGTTGTTTTCTTTGGGTTGATGTTTCACGTCAAGTGCTTCAATCATCTTTATCCACACGTGTGGATCGGATGATTGAAGCAGGTCAAGTTGACGAAGTTCGTGAAATATTTAACAAAGAAAATCATGATTATACAAGAGGGATACGAAGAGCCATTGGTGTACCTGAATTTGACCAATTTTTTAGAGCTGAGTTAGAAGGAAAAGTTGATGAAAGAACCATGAAGAAGCTTCTAGAAGTTGCTATTGATGCTCTTAAGATAAATAATATTAAGCTTGCAAATAGACAAGTTCAAAAGATTCATAGGCTTTATGGTATGTGGAAGAGGAACATGCACCGTCTTGATGCTACGGAGGTGGTGCTTAAGGAGAAAACATGGGAGGATTGTGTTTTGGCAAAGAGTCTTAGGATTGTTCACAAGTTTCTATACGATGATTGTTCACGTGTTAGAAATGGTGGTGGAAGTGGTGGTGGTTTAGTTGTGCCTGCAAATATTGGTTCTGCCACGGTGGCAACAGCAGTAACCCATTAG 996 0.4026 MMNIFSVSGAVACKPLVSFQPPLMDNNSLFQQHRNKEKVLVIMGATGTGKSKLAIDLATHFPPAEIINSDKMQVFKGLDITTNKVTEEECRGVHHHLLGTVDPNSDFTSKEFCEQATMATSSIVARDGLPIIAGGSNSYIEALVNHHHEFHTRYECCFLWVDVSRQVLQSSLSTRVDRMIEAGQVDEVREIFNKENHDYTRGIRRAIGVPEFDQFFRAELEGKVDERTMKKLLEVAIDALKINNIKLANRQVQKIHRLYGMWKRNMHRLDATEVVLKEKTWEDCVLAKSLRIVHKFLYDDCSRVRNGGGSGGGLVVPANIGSATVATAVTH 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00876 331 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 165 266 - -
Mepo1g00876 331 Pfam IPP transferase 150 253 - -
Mepo1g00876 331 Pfam IPP transferase 73 148 - -
Mepo1g00876 331 FunFam Adenylate isopentenyltransferase 5, chloroplastic 165 266 - -
Mepo1g00876 331 Gene3D - 36 297 IPR027417 -
Mepo1g00876 331 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 36 297 IPR039657 -
Mepo1g00876 331 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 199 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00876 Mepo-Chr1 8367983 8369731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00876 152 297 C2H2 Transcription Factor Family AT2G27760 32.948 7.83e-19 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00876 K10760 - gmx:100778430 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00876 1 8367983 8369731 Mepo6g00850 6 8737216 8739431 PCT