Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00875 ATGGCACTTCTTGGTGGTGGTAGTATTATTACTATATGCAAACCCCAAATTGTATTCCTTCTTCATCTGTCTGGGAATTTGAAGAAACAAACAGTTTCGAAAATCACATTTCCAACTCCAACAAAATTTGCATTTGCACACACTCTTTCACTTTCAGTTTCTACCTCCACCTCTCTTCTTCTCTATGCACCTCTACGGTTTTGCTCCACCTCCTCTGAATCTTCTGTCGAATCCAAAATCTTCATCAAAGGGCTTCCTCTTTCAACCACTGAATTGCATTTAACAAAAGTGTTTTCAATGTTCGGTGAAGTTACTCAAGTCAGGCTTTTGATAGATAAAAAAACTGGGCAGTCTCTAGGATTTGCATATATTTGGTTTGTCGAGGAAGAGTCTGCACAATCAGCTGCAAAAGAGATGAATGGAAAGTTTTTCTATGGCAGGTTTATTTATGTTACAATTGCAAAGCCTGGATCATCAAAAAGTTTGAAGAGAAAAGCCTACAAATTTTGA 510 0.3765 MALLGGGSIITICKPQIVFLLHLSGNLKKQTVSKITFPTPTKFAFAHTLSLSVSTSTSLLLYAPLRFCSTSSESSVESKIFIKGLPLSTTELHLTKVFSMFGEVTQVRLLIDKKTGQSLGFAYIWFVEEESAQSAAKEMNGKFFYGRFIYVTIAKPGSSKSLKRKAYKF 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00875 169 Gene3D - 66 167 IPR012677 -
Mepo1g00875 169 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 78 156 IPR000504 GO:0003723
Mepo1g00875 169 SMART rrm1_1 79 152 IPR000504 GO:0003723
Mepo1g00875 169 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 80 149 IPR000504 GO:0003723
Mepo1g00875 169 SUPERFAMILY RNA-binding domain, RBD 77 161 IPR035979 GO:0003676
Mepo1g00875 169 PANTHER RNA-BINDING MOTIF PROTEIN, X-LINKED 2 74 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00875 Mepo-Chr1 8350331 8352753 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00875 6 156 Eukaryotic Initiation Factors Gene Family AT3G11400 27.273 4.98e-13 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00875 - - psat:127073405 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00875 1 8350331 8352753 Mepo1g00875 1 8350331 8352753 ECH