Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00847 ATGTTACTGATCCATATATGTAATTGTATCAAGCTTGAAATTTGTAATTGTAATTTCTTGTTAGCTGTAAAGGATTATAAAAAATTCAGCATATCTAAGAATGTTTACCCTGTTAATGTATTTTACTTTGTTGATCGAGTAGCAATTCGTGCAATCGAGTTGAAGAATCATTCTTCCCTCAATGGAAAAGTGATAAGGGTCATGTGGTTAAGCCGTGATGCGGATGCAAGGAAAAGTGGCAAAGGGAATGTGTTTGTTAAGAACTTGGCAGAATCCATAGATAATGTGGGACTACATGATTTATTTCAAAATATGGGAACATTTTGTCCAGCAAAATTGCCATGTCTGAGGATGGGAAGAGCAAAGGGTTTGGTTATATCCAGTTTGATTCAGAGGAGTCTGCAAATGATGCTATCCAGAAAATGA 426 0.3568 MLLIHICNCIKLEICNCNFLLAVKDYKKFSISKNVYPVNVFYFVDRVAIRAIELKNHSSLNGKVIRVMWLSRDADARKSGKGNVFVKNLAESIDNVGLHDLFQNMGTFCPAKLPCLRMGRAKGLVISSLIQRSLQMMLSRK 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00847 141 SUPERFAMILY RNA-binding domain, RBD 42 116 IPR035979 GO:0003676
Mepo1g00847 141 Gene3D - 48 77 IPR012677 -
Mepo1g00847 141 Gene3D - 78 123 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00847 Mepo-Chr1 8155509 8156049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00847 51 123 Eukaryotic Initiation Factors Gene Family AT2G36660 53.425 7.57e-20 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00847 K13126 - jre:109008467 101.679