Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00846 ATGCGAGATGACAAAGGGACTAGCAAGGGGTTTGGTTTTGTCTGTTTTTCTACCCTGATGGAGGCCTGTGAGTCTGTGAGCTGTTTTAATGGGTGCATGTTCCATGGCAAACCACTGTATGTTGATTTTGCTCAGAAGAAAGAGGATAGGAAAAGACTATTGCAGAACATGCATGCTCAGAAACTAGAAGGATTAGCAGGACCTTCTTCTACAGCTGTTATCCCTGGTGCACGTCCTCCTCCTTTCATCTACAGAGCTTCTGGTGTTGTTTATCACCCTCCTCTGGGATCAGGATGGAGTGCTAATGGCTTTGCATCACCTTCTATAACATTACAACAATAA 342 0.4444 MRDDKGTSKGFGFVCFSTLMEACESVSCFNGCMFHGKPLYVDFAQKKEDRKRLLQNMHAQKLEGLAGPSSTAVIPGARPPPFIYRASGVVYHPPLGSGWSANGFASPSITLQQ 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00846 113 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 46 IPR000504 GO:0003723
Mepo1g00846 113 Gene3D - 1 66 IPR012677 -
Mepo1g00846 113 SUPERFAMILY RNA-binding domain, RBD 1 55 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00846 Mepo-Chr1 8153904 8154690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00846 1 92 Eukaryotic Initiation Factors Gene Family AT2G36660 52.688 6.99e-24 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00846 K13126 - gmx:100804671 131.339