Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00836 ATGTCTTCCCCTCCTTCAACCACCACCCCTCCTCCTCTCTCCGATCCCCCCACCGCCGTCCCCCTCCCTCTCGCGCTCCCTGCTCCACTCCCTATCCCACCCTCCACCCGCCGTCTCCCTCCTCCCTGCTGGTCCCCCGAAGAAACACTAGCTCTCATCGACTCCTACCGTGAAAAATGGTACTCTCTTGGCCGCGGTAACCTCAAAGCCACTCACTGGCAAGAAGTCGCTGACGCTGTTTCAAATCGTTGCCCTAACGTTACTCCGGCGAAAACTCCTGTTCAATGCCGTCACAAGATGGAGAAACTTCGGAAACGTTATCGTACTGAGATTCAACGTGCTCGCTCGCTTCCTCATTCGAGATTCAATTCCGCGTGGGTTCACTTTAAGCTTATGGATTCCATGGAGAAAGGTCCTTCTCCTGTTAAATCTGAAAACAATGATTCTGATAGTGAGGATGAAGATGAAGATCACGATCAAGATCTGTATTTAGATATCAAAAATGGTCATGGATCTAATACTAGAAGTATCAATAAGTTGTATAAGAACGGTTTCGGTGGTGGTTTCAGTGGTGGTGGTTGTGGTGTTGGTGGAGGATTTAGGATTAGGTATCCACCGGCACAACCTGAATCGAAATTTTCTTCTGATCAGAAATATAACCCTAATCCTAATCTGAATCAGAACTACCATACTCCACCGATGGCAACGGCGACAAAGGGATATGGGAACAAGAGGGAGAGAGATCCATTGACTGAGGTTGTATCTGCAATTAAATTGCTGGGTGATGGGTTTGTGAGAATGGAGCAAAAGAAGATGGAAATGGCGAGGGAGATTGAAACTATGAGAATGGAGATGGAAATGAAGCGTACTGAGATGATTCTTGAATCTCAACAGCGAATTGTCGAGGCGTTCGCTAAGGCAGTTTCCGATGATAGCAATAACAACAACATCAACAAGATGATGAAGCCTATAAATAAGAGAATTCCATCACCACAACAACCATAA 1005 0.4657 MSSPPSTTTPPPLSDPPTAVPLPLALPAPLPIPPSTRRLPPPCWSPEETLALIDSYREKWYSLGRGNLKATHWQEVADAVSNRCPNVTPAKTPVQCRHKMEKLRKRYRTEIQRARSLPHSRFNSAWVHFKLMDSMEKGPSPVKSENNDSDSEDEDEDHDQDLYLDIKNGHGSNTRSINKLYKNGFGGGFSGGGCGVGGGFRIRYPPAQPESKFSSDQKYNPNPNLNQNYHTPPMATATKGYGNKRERDPLTEVVSAIKLLGDGFVRMEQKKMEMAREIETMRMEMEMKRTEMILESQQRIVEAFAKAVSDDSNNNNINKMMKPINKRIPSPQQP 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00836 334 Coils Coil 264 284 - -
Mepo1g00836 334 ProSiteProfiles Myb-like domain profile. 44 104 IPR001005 -
Mepo1g00836 334 Coils Coil 97 117 - -
Mepo1g00836 334 MobiDBLite consensus disorder prediction 1 31 - -
Mepo1g00836 334 SMART 118neu2 51 140 IPR006578 -
Mepo1g00836 334 MobiDBLite consensus disorder prediction 135 158 - -
Mepo1g00836 334 Gene3D - 44 109 - -
Mepo1g00836 334 MobiDBLite consensus disorder prediction 313 334 - -
Mepo1g00836 334 FunFam Trihelix transcription factor ASIL2 44 109 - -
Mepo1g00836 334 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 14 311 IPR044823 -
Mepo1g00836 334 Pfam Myb/SANT-like DNA-binding domain 42 135 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00836 Mepo-Chr1 8031856 8033403 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00836 2 135 Trihelix Transcription Factor Family AT3G14180 33.793 2.10e-16 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mepo1g00836 Myb_DNA-bind_4 4.9e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00836 - - mtr:25494055 499.975