Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00832 ATGGGTTGTGTTCATGGTAAATGTTGCTGTGTGAAATCTTCGGATGGCGGCTCTAGAAAACTTGGTTTTCATCATAGCCATAGGAAGAACATACAAGCTCAGAGAGTGTTGAAAAATGTTTCTGTTCCTTCACACAACTTTGTTTTGGAGTATACCGTTCTCACGCTGCGAGGTTACTACCCTGACTCTCTGGATAAACAAAACCAAGATAGTTTCTGCATTAGGACAGAAATTCAAGGTAACCCGAATATCCATTTTTTTGGTGTTTTTGATGGGCATGGTCAATTTGGTAGTCAATGTTCAAACTTCGTTAGGGATAGGTTGGTAGAGAAGTTATCTAATGACCCTGCATTGGTGGAGGATCCTGTTCAAGCTTACAATTCTGCGTTCTCGGCAACAAATCATGAATTGCATACTAGTGACATTGATGATACTATGAGTGGTACAACGGCTATTACAGTGCTTGTTGTTGGGGACATCCTTTATGTTGCTAATGTTGGTGATTCAAGAGCTGTGCTAGCTGTTAAGGGCGAGGATCGGATTATTGCAGAGGACTTGTCCTCTGATCAGACTCCATTTCGGAGAGATGAATATGAGAGAGTTAAACTTTGTGGAGCGAGGGTGTTGAGTGTTGATCAAGTGGAAGGGATTAAGGATCCAAATATCCAACATTGGGGCAACGAAGAGAGTTGGGATGGTGATCCTCCGAGATTGTGGCTTCCAAATGGGATGTTTCCTGGAACTGCCTTCACAAGGAGTGTAGGGGATAGATTGGCAGAGACAATTGGTGTGGTTGCAACTCCAGAGGTGTCAATAGTTCGGCTTACACCTAATCATCTCTTCTTTATTGTTGCTAGTGATGGCATATTTGAATTCTTGTCCAGCCAAACTGTTGTTGATATGGCAGCAAGATATACAGATCCTCGTGATGCATGTGCGGCTATTGCTGAAGAGTCATATAAACTATGGTCGGAACTTGTGAATCGAACAGATGATATAACAATTATCATTGTCCAGATTAAAGGACTCTCGAATAATTCAAGCACATCTGGAGTTCAATTAAGTGAGGTCAATGTCGGTACTGCTATGAGAACCAGGACAGGAACTTCTGAGATATCTACTACCACTGAATTTGATGTTTATCATTCTGTGACGAACAGTTTCTCTGATTCACAATCCTGCCAGTCAAAGATCAGTTGA 1200 0.4183 MGCVHGKCCCVKSSDGGSRKLGFHHSHRKNIQAQRVLKNVSVPSHNFVLEYTVLTLRGYYPDSLDKQNQDSFCIRTEIQGNPNIHFFGVFDGHGQFGSQCSNFVRDRLVEKLSNDPALVEDPVQAYNSAFSATNHELHTSDIDDTMSGTTAITVLVVGDILYVANVGDSRAVLAVKGEDRIIAEDLSSDQTPFRRDEYERVKLCGARVLSVDQVEGIKDPNIQHWGNEESWDGDPPRLWLPNGMFPGTAFTRSVGDRLAETIGVVATPEVSIVRLTPNHLFFIVASDGIFEFLSSQTVVDMAARYTDPRDACAAIAEESYKLWSELVNRTDDITIIIVQIKGLSNNSSTSGVQLSEVNVGTAMRTRTGTSEISTTTEFDVYHSVTNSFSDSQSCQSKIS 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00832 399 ProSiteProfiles PPM-type phosphatase domain profile. 50 340 IPR001932 -
Mepo1g00832 399 SMART PP2C_4 46 338 IPR001932 -
Mepo1g00832 399 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
Mepo1g00832 399 Gene3D - 40 342 IPR036457 -
Mepo1g00832 399 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 45 342 - -
Mepo1g00832 399 Pfam Protein phosphatase 2C 73 319 IPR001932 -
Mepo1g00832 399 SUPERFAMILY PP2C-like 39 342 IPR036457 -
Mepo1g00832 399 CDD PP2Cc 66 340 IPR001932 -
Mepo1g00832 399 PANTHER PROTEIN PHOSPHATASE 68 339 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00832 Mepo-Chr1 7963492 7967164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00832 1 345 PP2C-type Phosphatase Gene Family AT3G06270 69.452 1.61e-177 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00832 - - gmx:100797866 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00832 1 7963492 7967164 Mepo1g00832 1 7963492 7967164 ECH
Mepo1g00832 1 7963492 7967164 Mepo6g00798 6 8182233 8185248 PCT