Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00819 ATGGGTCGATATCGAAGCCGGAGCAGAAGCTACAGCCCTCGGCGGCGTAGCAGAAGTCCACCACCTCGCGGTCGCAAGCGTTACGACGATGATCGCTATCCTGACAACAGGTCTCGCAGAGACCGTCGTTCTCCTCTTCCTTCTGGATTACTCGTTCGTAATCTCCCTCTTGATGCAAGACCTGAAGATCTTAGGGGTCCATTTGAACGCTATGGTCCTGTCAAGGATGTTTACCTTCCTAGAAACTATTACACTGGTGAGCCTCGTGGCTTTGGATTTGTGAAATACCGACATGGTGAAGATGCGGCAGAGGCAAAGCAACAACTTAATCACACTATAATTGGTGGACGTGAAATAAGAATTGTATTTGCTGAGGAAAATAGGAAAACCCCTCAAGAAATGCGTGTTACTACTCATGGAAGTGGTCGAAGTGGAGGTGGTGGTAGTAGAAGGAGAGCTCGGTCAAGATCCCCACGACGCAGCCGTCATCGATCCTACTCCAGGTCTCCATCACCAGCCAGGGATGATTCAAGGGATGGCAGGGGTAGGGATGATTATCCCCCAAAGCGATCAAGATCTTATTCTAGGTCTGTCTCTCCCGGTGATGGGAAGGATGACAGGTCCCCTCGTGCCAAGGACGACAGAAGGTCCCCTCATGCCAAGGACGACAGAAGGTCCCCTCGTGCCAAGGATGACGGAAGGTCCCCTCGTGCCAAGGATGACGGAAGGTCCCCTCGTGCCAAGGATGACGGAAGGTCCCCTCGTGCCAAGGATGACGGAAGGTCCCCTCGTGCCAAGGATGACAGAAGGTCTCCCCGCACCAAGGACGAGCGAAGGTCCCCTCGTGTCAAGGATGAGAGAAGGTCCTCCCGTGCCAAGGAGAATGGTCGGAGTCCAATTGATGAGAAGGATCTGGCGCCTAGCAGATCTCCAAGCCCCAGGGGCGATGATCGCAGTCCTTCAAGGTCTCGTTCACGGTCATACAGTCCACGCTGA 996 0.5392 MGRYRSRSRSYSPRRRSRSPPPRGRKRYDDDRYPDNRSRRDRRSPLPSGLLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAEAKQQLNHTIIGGREIRIVFAEENRKTPQEMRVTTHGSGRSGGGGSRRRARSRSPRRSRHRSYSRSPSPARDDSRDGRGRDDYPPKRSRSYSRSVSPGDGKDDRSPRAKDDRRSPHAKDDRRSPRAKDDGRSPRAKDDGRSPRAKDDGRSPRAKDDGRSPRAKDDRRSPRTKDERRSPRVKDERRSSRAKENGRSPIDEKDLAPSRSPSPRGDDRSPSRSRSRSYSPR 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00819 331 FunFam Serine/arginine-rich SC35-like splicing factor SCL28 2 140 - -
Mepo1g00819 331 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 37 146 - -
Mepo1g00819 331 MobiDBLite consensus disorder prediction 149 167 - -
Mepo1g00819 331 MobiDBLite consensus disorder prediction 199 324 - -
Mepo1g00819 331 MobiDBLite consensus disorder prediction 1 22 - -
Mepo1g00819 331 SMART rrm1_1 49 122 IPR000504 GO:0003723
Mepo1g00819 331 MobiDBLite consensus disorder prediction 125 331 - -
Mepo1g00819 331 Gene3D - 3 139 IPR012677 -
Mepo1g00819 331 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 48 126 IPR000504 GO:0003723
Mepo1g00819 331 MobiDBLite consensus disorder prediction 1 51 - -
Mepo1g00819 331 MobiDBLite consensus disorder prediction 168 191 - -
Mepo1g00819 331 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 50 120 IPR000504 GO:0003723
Mepo1g00819 331 MobiDBLite consensus disorder prediction 23 46 - -
Mepo1g00819 331 SMART rrm2_1 49 122 IPR003954 GO:0003676
Mepo1g00819 331 SUPERFAMILY RNA-binding domain, RBD 50 155 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00819 Mepo-Chr1 7833724 7837884 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00819 52 110 Eukaryotic Initiation Factors Gene Family AT3G11400 44.068 8.11e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00819 K12900 - gmx:100788749 237.269