Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00810 ATGGGGTGTGTGTTTGGGAAAGAGGGTTCAGAAAGGAAGAAAGAGGTGGTGAAAGTTGTTGCTAAGGTGGAGGAAGTTGAGTTTGAGGTTCAAAATGATATGAAAAATGAGCAAGAGGGTGGAGAGGATGAGAAGAGGAGGAGACAAAGGGAAAGGAGGGAGAGGAGGCAATCTTTGAAGCCTAATCCAAGATTGAGCAATCCACCTAACCATATACATGGTGAACAAGTGGCTGCAGGGTGGCCATCTTGGCTTTCCAAGGTTGCTGGAGAAGCCATACATGGATTGACGCCTCGAAGAGCTGATTCTTTTCACAAACTTGATAAGATTGGACAAGGCACATATAGCAATGTTTACAAAGCTAAAGATACTCTAACTGGGAAAATTGTTGCATTAAAGAAGGTTCGTTTTGACAATTTAGAGCCAGAGAGTGTGAAATTCATGGCCAGAGAAATTCTGATATTGCGTCGTCTGGATCATCCCAATGTTATGAAACTAGAAGGTTTAGTGACTTCTAGGATGTCATGTAGTTTGTATCTTGTCTTTCAATACATGGAGCATGATTTGGCTGGACTTTCAACGAGCCCCGCAATTAAGTTTACGATGTCTCAGGTTAAATGTTACATGCATCAGCTACTTTCTGGACTGGAACACTGTCACAACCGCAATGTGCTGCATCGTGATATAAAGGGATCAAACCTTCTTGTTGACAATGAAGGAATTCTTAGGATTGCTGATTTTGGATTAGCATCCTTCTTTGATCCTAATCACAAACACCCGATGACTAGTAGGGTGGTTACTTTATGGTATCGATCTCCCGAACTTCTTCTTGGAGCCACTGATTATGGTGTAGGAATTGACCTTTGGAGTGCTGGCTGTATACTTGCTGAATTATTGGCTGGAAGGCCTATTATGCCTGGTCGAACAGAGGTGGAACAACTACATAAGATATTTAAGCTATGTGGTTCTCCTTCTGAAGAATATTGGAAAAAGGCAAAGTTGCCACATGCCACAATTTTTAAGCCACAACAATCATATAAGCGGTGCATATCAGAGAAATTTGATGATTTCCCACTATCGTCATTACCACTAATTGAGACCCTTCTAGCAATCGATCCAGCTGAACGTAAAACTGCCACTGCTGCATTGCACAGCGAATTCTTTACAACCCAACCTTATGCTTGTGAACCCTCTAACCTTCCAAAATATCCTCCCAGTAAGGAGATGGATACAAAGCTTCGGGACGAAGAAGCTAGAAGATTAAGAGCTGTTGGCAAAGGTAATGCTGTTGGCACTAAGAAATCTCGTTCGCGTGATCGAAGTGGTAGGGGAATTCCACTTCCAGAGGTCAATGCTGAGCTGCAAGCCAATATCGATAGATGGAGACTGGTAACGCGCGCTAATGCTAAGAGTAAAAGTGAGAAGTTTCCTCCTCCGCATCAAGATGGAACTTTAGGCTATCCTTTTGGTTCTTCATGTCATATGAATCCAGTTTTTGATCCTCCTGATGTTCCATTTAGTTCCACAGACTTCTCATATCATAAAGCAAATATTCAGACCTGGTCCGGCCCATTGGTGGAACCGAGGGTGAGTGCGCCAAGGAGAAAGAAGAACAAGGCAGGTGACCGGCATATACAATCGAAGTCATCAAAGGACATAAAAAGATAG 1668 0.4281 MGCVFGKEGSERKKEVVKVVAKVEEVEFEVQNDMKNEQEGGEDEKRRRQRERRERRQSLKPNPRLSNPPNHIHGEQVAAGWPSWLSKVAGEAIHGLTPRRADSFHKLDKIGQGTYSNVYKAKDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVMKLEGLVTSRMSCSLYLVFQYMEHDLAGLSTSPAIKFTMSQVKCYMHQLLSGLEHCHNRNVLHRDIKGSNLLVDNEGILRIADFGLASFFDPNHKHPMTSRVVTLWYRSPELLLGATDYGVGIDLWSAGCILAELLAGRPIMPGRTEVEQLHKIFKLCGSPSEEYWKKAKLPHATIFKPQQSYKRCISEKFDDFPLSSLPLIETLLAIDPAERKTATAALHSEFFTTQPYACEPSNLPKYPPSKEMDTKLRDEEARRLRAVGKGNAVGTKKSRSRDRSGRGIPLPEVNAELQANIDRWRLVTRANAKSKSEKFPPPHQDGTLGYPFGSSCHMNPVFDPPDVPFSSTDFSYHKANIQTWSGPLVEPRVSAPRRKKNKAGDRHIQSKSSKDIKR 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00810 555 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Mepo1g00810 555 MobiDBLite consensus disorder prediction 426 446 - -
Mepo1g00810 555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Mepo1g00810 555 FunFam probable serine/threonine-protein kinase At1g54610 91 186 - -
Mepo1g00810 555 MobiDBLite consensus disorder prediction 522 555 - -
Mepo1g00810 555 ProSiteProfiles Protein kinase domain profile. 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00810 555 FunFam probable serine/threonine-protein kinase At1g54610 187 428 - -
Mepo1g00810 555 Pfam Protein kinase domain 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00810 555 MobiDBLite consensus disorder prediction 29 60 - -
Mepo1g00810 555 CDD STKc_CDK9_like 104 388 - -
Mepo1g00810 555 Gene3D Phosphorylase Kinase; domain 1 92 186 - -
Mepo1g00810 555 MobiDBLite consensus disorder prediction 29 73 - -
Mepo1g00810 555 Gene3D Transferase(Phosphotransferase) domain 1 187 426 - -
Mepo1g00810 555 PANTHER CELL DIVISION PROTEIN KINASE 102 392 - -
Mepo1g00810 555 SUPERFAMILY Protein kinase-like (PK-like) 98 393 IPR011009 -
Mepo1g00810 555 SMART serkin_6 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00810 Mepo-Chr1 7760153 7763502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00810 99 426 Core Cell Cycle Gene Families AT5G10270 50.291 4.49e-113 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mepo1g00810 Pkinase 1.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00810 K08819 - gmx:100791757 898.271