Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00805 ATGGGTAACAGAAAACGTAGCACTACTACTAAAACCGAAGAGGTTCTAAACGTTGAACGTGACAGAAGGATGAAAATGAAGCAAATGTTCACTCACCTCACTACCACTGTCCCAACTCTCTACCCTAATGCTACACATGAAGTGATTGTGAACGAAACAATCCAGTACATTAAGGAACTTGAGGAAAAGAAGAGAATGTTGGAGGAGATGAAGGAATCAAAATCAAAGAAACCTGTTGAAGGGGGTTTTAATTTGTTGGCTCCGTGTCGTACTAGGAATCCCAATTTCTCTGTTACGGTTACTGTTTCAAGCAATGTGGCTTTCTTTGGGATTGAATCTGTGGCTAAACATGGTTTGATCACTGTGATTTTCAAGGTGTTTTTGAAGAATGAAGCTGAGGTTTTAGCTGCTAATGTTTCTGTTAATCATGGGAATTTGATCTTGTCGATCACTTCTTTGGTTCAAAATGGTGCTGTTATCGAGAAGATTAAGAGAGAGATTATGAGTTTGTAG 513 0.3899 MGNRKRSTTTKTEEVLNVERDRRMKMKQMFTHLTTTVPTLYPNATHEVIVNETIQYIKELEEKKRMLEEMKESKSKKPVEGGFNLLAPCRTRNPNFSVTVTVSSNVAFFGIESVAKHGLITVIFKVFLKNEAEVLAANVSVNHGNLILSITSLVQNGAVIEKIKREIMSL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00805 170 Coils Coil 50 77 - -
Mepo1g00805 170 Gene3D - 8 80 IPR036638 GO:0046983
Mepo1g00805 170 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 10 60 IPR011598 GO:0046983
Mepo1g00805 170 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 18 152 IPR044278 GO:0003700|GO:0006355|GO:0009960
Mepo1g00805 170 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 16 76 IPR036638 GO:0046983
Mepo1g00805 170 Pfam Helix-loop-helix DNA-binding domain 18 61 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00805 19 142 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 28.877 1.43e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo1g00805 HLH 0.00011 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00805 - - psat:127073348 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00805 1 7723763 7724405 Mepo1g00805 1 7723763 7724405 ECH