Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo1g00787 | ATGGAAGAATCAACTTCCGATAACAACGACCGGAAAAAAATCCGCAACATATGCATCTTGGCACACGTCGACCACGGCAAGACAACGCTCGCGGACCAGCTTATCGCGGCGGCGAGTGGCGGCATGGTTCATCCAAAGGTTGCCGGTAAAGTCCGTTTTATGGATTACCTCGATGAAGAACAACGTCGAGCTATAACAATGAAGAGTTCATCAATTTCGCTTCACTACAATCACCATACTGTTAATCTCATCGATTCCCCTGGTCATATTGATTTCTGCGGCGAAGTTTCCACCGCAGCGCGTCTTTCGGATGGTGCGCTTCTTCTTGTTGATGCTGTTGAAGGTGTTCATATTCAAACTCATGCTGTTCTTCGTCAATGCTGGACTGAAATGCTTGAACCGTGTCTTGTGTTGAATAAGATGGATAGGTTGATAACTGAATTGAATCTCACTCCTTTGGAAGCGTATACGCGTCTTTTGAGGATTGTTCATGAGGTTAATGGGATTTGGAGTGCTTATAATTCGGAGAAATATTTATCTGATGTGGATGCTCTTCTTGCTGGTGGGACTGCTGCTGGAGGTGAAGTTATGGAGGATTATGATGACGTTGAAGATAAGTTTCAGCCTCAGAAAGGGAATGTTGTGTTTGCTTGTGCTTTGGATGGTTGGGGTTTTGGGATTCATGAATTTGCTGAGATTTATGCTTCAAAGCTTGGTGGCAGTGCTAGTGTGGGTGCATTGCTGAGGGCTTTGTGGGGTCCATGGTATTATAATCCGAAGACAAAGATGATTGTTGGAAAGAAAGGGATTAGTGGTAATAAGGCTAGGCCTATGTTTGTTCAGTTCGTGTTGGAGCCTTTGTGGCAGGTTTATCAAGGAGCACTTGGTGGGGATAAAGGGATGGTTGAGAAGGTTATTAAGTCTTTTAATTTGCAGATTCCGGCGCGTGAGTTGCAGAATAAGGATTCTAAGGTTGTGCTTCAAGCTGTCATGAGTCGTTGGCTTCCTCTTTCAGATGCCATTTTGTCTATGGTATTGAAGTGTCTTCCGGATCCTGTGGAAGGGCAGAAGTCTCGGATATCGCGGCTGATTCCTGAGCGCAAGGTTGGTTCTGAGAATAGGGTTGATAGGAGGGTGGTGGAAGAGTCTGAGCTCGTGAGGAAGTCGGTGGTGGAGTGTGATTGTAGGGATGAGGCGCCTTGTGTTGCCTTTGTGGCGAAAATGTTTGCTCTTCCTGTTAAAATGCTTCCTCCTCTTCAACCTGGGGAAGGGAGTTTTGGTGAGGAAGGTGAGGGTGAATCTGATGAGTGTTTTTTGGCATTTGCTAGAATATTTAGTGGTGTTTTGTCTGTTGGGCAGAGAGTTTTTGTGATTTCGGCTTTGTATGATCCTTTGAAAGGGGAATCAATGCAAAAGCACATTCAAGAGGCTGAATTGAAATCCATGTATCTGATGATGGGTCAAGGGTTGAAAGTAGTGAAATCTGCAAAAGCAGGAGATGTTGTTGCGATCCGAGGACTTGGGCAGTATATTTTGAAAAGTGCTACACTTTCTTCTACTAGGAATTGTTGGCCTTTTTCGAGCATGGCATTTCAAGTTGCCCCAATTTTGAGGGTTGCTATTGAGCCATCTGACCCTGCAGATATGGGTGCACTGCTCAAAGGCTTGAGGCTTTTGAATCGAGCGGATCCGTTTGTTGAGGTTACGGTTTCTGCTAGAGGAGAACATGTTCTTGCCGCAGCTGGTGAAGTTCATCTCGAGAGATGCATAAAGGATTTGAAGGATAGGTTTGCAAAAGTAAGCTTGGAAGTCTCTCCACCCCTTGTATCCTACAAAGAGACCATTGAGGGAGAGGTATCCAACATGCTGCAAAATTTGAAAGTTCTTAGCAAGAACTTGGATTATGTTGAGAAAACGACGCCTAATGGAAGATGCGTTGTACGCGTGCAGGTGATGAAACTTCTACCTTCTCTCACAAAGGTGCTTGATGAAAGCGCCAATTTACTTGGAGATGTCATTGGAATTAAGTCGGAGCATACAGTTAAAAGTATGGAAATGCAGAGAACAAATATTCTCGAAAAGGAGAATCCAGCTGAAGTGATTAAAAAACGTATAATGGATGCAATTGAGAGTGACATTTTGTGTAGGATTGAGAATGATGAAGACCATGCTGAGAAATGTAGATTGAAGTGGTTAAAGCTTTTGAGAAGGATATGGGCTCTTGGACCGAGTTACATCGGCCCTAACGTTCTTTTCACTCCTGATATTAAAGCAGAAAGTAGCGATAGCTCTGTTCTAATACGTGGTTCTTCTCAACTATCTGAAAAGTTGGGTTTTGTTGCTAATTCTGGTAACAGTAACTCGGTTTCGGAGGCATCTTCAAATGAGAGCCAAGTGTTGTATATGGATGCCGAGCGTCTTGAGAGTAATGTTATAACCGGGTTCCAACTAGCAACTTCAGCTGGGCCTTTATGCGATGAACCTATGTGGGGTTTGGCATTTGTCATTGAGGCACGTATATCTCCATCTACAGGGCATCATGATGAATCCAAAACACACCAACAATCCGATCAGTATGGCATCTTTGCAGGGCAGGTTATTGCAACCGTCAAAGATGCTTGTAGGGAAGCTGTGCTAAAGAATAAGCCAAGACTTGTGGAAGCAATGTACTTTTGTGAGTTGAATACCACTACTGAATATTTGGGTCCCATGTATGGTGTACTTTCCCGAAGACGGGCTAGAATTTTGAAAGAAGAGATGCAGGAAGGTTCCCCTTTATTCACTGTGCATGCATATGTTCCTGTTTCTGAGAGTTTTGGTTTTACTGATGAGCTTAGAAGTCGGACTTCTGGCGCTGCAAGTGCACTTCTTGCCCTTAGCCATTGGGAAGCACTACTTGAGGATCCTTTCTTTGTACCTAAAACAGAAGAGGAAATCGAAGAGTTTGGAGATGGTTCCAGCGTTCTTCCAAATACAGCAAGAAAATTGATTGACGCAGTCAGACGGCGGAAGGGCCTTCCTGTGGAGGAAAAGGTAGTACAACATGGAACAAAGCAGAGGACACTCGCTCGTAAAGTTTGA | 3081 | 0.4417 | MEESTSDNNDRKKIRNICILAHVDHGKTTLADQLIAAASGGMVHPKVAGKVRFMDYLDEEQRRAITMKSSSISLHYNHHTVNLIDSPGHIDFCGEVSTAARLSDGALLLVDAVEGVHIQTHAVLRQCWTEMLEPCLVLNKMDRLITELNLTPLEAYTRLLRIVHEVNGIWSAYNSEKYLSDVDALLAGGTAAGGEVMEDYDDVEDKFQPQKGNVVFACALDGWGFGIHEFAEIYASKLGGSASVGALLRALWGPWYYNPKTKMIVGKKGISGNKARPMFVQFVLEPLWQVYQGALGGDKGMVEKVIKSFNLQIPARELQNKDSKVVLQAVMSRWLPLSDAILSMVLKCLPDPVEGQKSRISRLIPERKVGSENRVDRRVVEESELVRKSVVECDCRDEAPCVAFVAKMFALPVKMLPPLQPGEGSFGEEGEGESDECFLAFARIFSGVLSVGQRVFVISALYDPLKGESMQKHIQEAELKSMYLMMGQGLKVVKSAKAGDVVAIRGLGQYILKSATLSSTRNCWPFSSMAFQVAPILRVAIEPSDPADMGALLKGLRLLNRADPFVEVTVSARGEHVLAAAGEVHLERCIKDLKDRFAKVSLEVSPPLVSYKETIEGEVSNMLQNLKVLSKNLDYVEKTTPNGRCVVRVQVMKLLPSLTKVLDESANLLGDVIGIKSEHTVKSMEMQRTNILEKENPAEVIKKRIMDAIESDILCRIENDEDHAEKCRLKWLKLLRRIWALGPSYIGPNVLFTPDIKAESSDSSVLIRGSSQLSEKLGFVANSGNSNSVSEASSNESQVLYMDAERLESNVITGFQLATSAGPLCDEPMWGLAFVIEARISPSTGHHDESKTHQQSDQYGIFAGQVIATVKDACREAVLKNKPRLVEAMYFCELNTTTEYLGPMYGVLSRRRARILKEEMQEGSPLFTVHAYVPVSESFGFTDELRSRTSGAASALLALSHWEALLEDPFFVPKTEEEIEEFGDGSSVLPNTARKLIDAVRRRKGLPVEEKVVQHGTKQRTLARKV | 1026 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo1g00787 | 1026 | FunFam | Elongation factor like GTPase 1 | 227 | 335 | - | - | |
Mepo1g00787 | 1026 | Pfam | Elongation factor Tu GTP binding domain | 12 | 252 | IPR000795 | GO:0003924|GO:0005525 | |
Mepo1g00787 | 1026 | Coils | Coil | 612 | 632 | - | - | |
Mepo1g00787 | 1026 | CDD | EF2 | 15 | 235 | - | - | |
Mepo1g00787 | 1026 | PANTHER | TRANSLATION ELONGATION FACTOR-RELATED | 10 | 1025 | - | - | |
Mepo1g00787 | 1026 | SUPERFAMILY | Translation proteins | 393 | 529 | IPR009000 | - | |
Mepo1g00787 | 1026 | SUPERFAMILY | Ribosomal protein S5 domain 2-like | 609 | 886 | IPR020568 | - | |
Mepo1g00787 | 1026 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 12 | 243 | IPR000795 | GO:0003924|GO:0005525 | |
Mepo1g00787 | 1026 | Gene3D | Yeast translation eEF2 (G' domain) | 227 | 335 | - | - | |
Mepo1g00787 | 1026 | Pfam | Elongation factor G C-terminus | 885 | 965 | IPR000640 | - | |
Mepo1g00787 | 1026 | FunFam | Elongation factor like GTPase 1 | 883 | 1018 | - | - | |
Mepo1g00787 | 1026 | Gene3D | - | 883 | 1017 | - | - | |
Mepo1g00787 | 1026 | PRINTS | GTP-binding elongation factor signature | 82 | 92 | IPR000795 | GO:0003924|GO:0005525 | |
Mepo1g00787 | 1026 | PRINTS | GTP-binding elongation factor signature | 134 | 143 | IPR000795 | GO:0003924|GO:0005525 | |
Mepo1g00787 | 1026 | PRINTS | GTP-binding elongation factor signature | 98 | 109 | IPR000795 | GO:0003924|GO:0005525 | |
Mepo1g00787 | 1026 | PRINTS | GTP-binding elongation factor signature | 62 | 70 | IPR000795 | GO:0003924|GO:0005525 | |
Mepo1g00787 | 1026 | PRINTS | GTP-binding elongation factor signature | 16 | 29 | IPR000795 | GO:0003924|GO:0005525 | |
Mepo1g00787 | 1026 | CDD | aeEF2_snRNP_like_IV | 606 | 891 | - | - | |
Mepo1g00787 | 1026 | Gene3D | Elongation Factor G (Translational Gtpase), domain 3 | 534 | 610 | - | - | |
Mepo1g00787 | 1026 | FunFam | Elongation factor 2-like protein | 5 | 215 | - | - | |
Mepo1g00787 | 1026 | FunFam | Translation elongation factor 2 | 534 | 610 | - | - | |
Mepo1g00787 | 1026 | SUPERFAMILY | EF-G C-terminal domain-like | 533 | 607 | IPR035647 | - | |
Mepo1g00787 | 1026 | Gene3D | Translation factors | 352 | 532 | - | - | |
Mepo1g00787 | 1026 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 8 | 350 | IPR027417 | - | |
Mepo1g00787 | 1026 | CDD | EF2_snRNP_III | 535 | 606 | - | - | |
Mepo1g00787 | 1026 | NCBIfam | small GTP-binding protein domain | 13 | 143 | IPR005225 | GO:0005525 | |
Mepo1g00787 | 1026 | CDD | EF2_II | 400 | 520 | - | - | |
Mepo1g00787 | 1026 | Pfam | Elongation factor Tu domain 2 | 439 | 517 | IPR004161 | GO:0005525 | |
Mepo1g00787 | 1026 | CDD | eEF2_snRNP_like_C | 887 | 965 | - | - | |
Mepo1g00787 | 1026 | SMART | EFG_C_a | 884 | 973 | IPR000640 | - | |
Mepo1g00787 | 1026 | SUPERFAMILY | EF-G C-terminal domain-like | 887 | 985 | IPR035647 | - | |
Mepo1g00787 | 1026 | Gene3D | - | 631 | 881 | IPR014721 | - | |
Mepo1g00787 | 1026 | Gene3D | - | 5 | 208 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo1g00787 | Mepo-Chr1 | 7524670 | 7527929 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo1g00787 | 7 | 1026 | Eukaryotic Initiation Factors Gene Family | AT3G22980 | 68.213 | 0.0 | 1414 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo1g00787 | K14536 | - | pvu:PHAVU_003G003900g | 1605.88 |