Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00740 ATGTCCGATCAGATGAATTTGAACATGGAGAACGAAAAAGAAATCGAAAACCACTATGCACTCAGCGGCAAGATAATGCTAACCGCCATTATCATTCTCTTTGCCGTTATCATAATAATGCTCTGTCTCCATTTCCTAATTCGATACTACCTTCTACGTGATCGAACCCGTCAACACCTCCGCCGTAACCGCCGTCAACCTTTCATCTTTTACGTTGATCCATCCGCCCCTGCTTCACTGACACTCGCCGTCTCTCGCGGCCTTGATGCCTCCGTGATCTCGTCGCTCCCAGTTTTCAAATTTTCCTCCAAGACGGATCAGGTGGTGGAATGCGCGGTTTGTTTGTCGGAGTTTGTAGATGGTGAAACGGGCCGGGTTTTACCCAAATGTAATCATAGTTTTCATATTGATTGTATTGATATGTGGTTTCAGTCTCATTCTACATGTCCGCTTTGTAGAGCGCCCGTTGAGGCTGCGCCGGTTCAAGCGACAATTGATATGTGTGAACCGGAATTGGTTTTGGGTTCGAGTTCTGGTGATGAAATGAACCGGTCTGTACCGGAATTTTCTTCTTCTTGTTCTGATGAGAAGCAATCTTCATTGGTTGACATTACCGTTGAGATTCCGAGAAGGAGTGAATCCGATTGCAAGAATTTTGCTGTGGGAGAGTCGAGTTGTGATTCACCATCATCGTTTCGGTCGCCAATGAGTCGTGTGTTGTCGTTCACGAGAATCCTCAGCAGAGAGAGGAAACCAAGCATTTCTCCGTCGTTGGATTGTGCCGCAGATGCAGAACGAGGTGAAAAGGAGGAGACTCAGTGA 822 0.4672 MSDQMNLNMENEKEIENHYALSGKIMLTAIIILFAVIIIMLCLHFLIRYYLLRDRTRQHLRRNRRQPFIFYVDPSAPASLTLAVSRGLDASVISSLPVFKFSSKTDQVVECAVCLSEFVDGETGRVLPKCNHSFHIDCIDMWFQSHSTCPLCRAPVEAAPVQATIDMCEPELVLGSSSGDEMNRSVPEFSSSCSDEKQSSLVDITVEIPRRSESDCKNFAVGESSCDSPSSFRSPMSRVLSFTRILSRERKPSISPSLDCAADAERGEKEETQ 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00740 273 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
Mepo1g00740 273 MobiDBLite consensus disorder prediction 252 273 - -
Mepo1g00740 273 CDD RING-H2_EL5-like 110 153 - -
Mepo1g00740 273 SUPERFAMILY RING/U-box 104 158 - -
Mepo1g00740 273 SMART ring_2 111 152 IPR001841 -
Mepo1g00740 273 FunFam RING-H2 finger protein ATL3 80 158 - -
Mepo1g00740 273 Pfam Ring finger domain 110 153 IPR001841 -
Mepo1g00740 273 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 79 159 IPR013083 -
Mepo1g00740 273 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 15 160 IPR044675 -
Mepo1g00740 273 SMART FANCL_C_2 107 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00740 Mepo-Chr1 7051690 7053026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00740 19 270 Rapid Response to Elicitors AT3G16720 47.887 3.19e-63 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00740 - - gmx:100791545 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00740 1 7051690 7053026 Mepo1g00740 1 7051690 7053026 ECH
Mepo1g00740 1 7051690 7053026 Mepo6g01459 6 15896316 15897939 PCT