Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00739 ATGGCAGGAGGAGCCATTGAAACCCAAAACCATGCTAGTAAGAAGAAGTTCGCCATTCTTGGTGTATCTTCAATCTTACTTATTGCCATGGTAGCCGCGGTGGCCGTTGGAATAAAAGACGGCGGCCAAGTTGAATCGGAAGGTGATAACCAAATTGCAAAATCACAAAAAAACGTTCAAATGCTTTGTGGAACAACAGAGTACAAACAAACATGCGAAAAGAGTCTTGCAAAAACAGGAAACAAAGACATGAAGGAATTGATCAAACAAGCATTCAATGCAACAGCTGAAGAACTCGTGAAACAAATCCACAACTCAACACTCTACAAGGAATTGGCTACCAATGACATGACAAAGCAAGCTATGGATATTTGCAAAGAAGTCCTTGGTTATGCAGTTGATGATGTTCATCAATCTATTCACACATTGGATAAATTTGATCTTAGCAAAATTGATGAGATTGCTTATGATCTTAAAGTTTGGCTCTCAGGTACACTTGCGAATCAACAAACATGTTTAGATGGATTTGAGAACACAACTACCCATGCAGGACAAACCATGGCTAAGGTTCTTAACGCTTCTTTGGAGCTAAGCAACAATGCTTTGGATATAATCAATGGACTTTCAGGATTTGTGAAAGATCTTAACTTGAGCTCTTTTGCAAGGGTTTTGAATAATAATAGGAAGCTTTTGTCTGAAGATGGTTTGCCATCATGGGTTTCTGAAAGTCAAAGGAAACTTCTTGCGGCTCCTGAGAACGTTAAGCCTAATGTTGTTGTTGCTCAAGATGGTAGTGGTCAATTTAAGACTTTGACTGAGGCACTTGCACTTGTTCCCAAGAAGAACAAAGTTCCTTTTGTTATTCATGTTAAGGCTGGTATCTATAAGGAGTATGTTGCTGTGGATAAACATAGGGACCATGTTACTATTATTGGTGATGGTCCCAAAAAGACCATATTTACTGGTAGCAAAAGCTATGGTGATGGTGTGCAGACTTACAATACCGCAACATTCAGTGTGAACTCTGCCCATTTCACGGCCCTTAACGTTGGATTCGAGAACTCAGCCGGTGCCGCAAAGCATCAAGCAGTGGCCCTCCGTGTAACAGCAGACAAAGCATTGTTCTACAACTGTGAAATGAACGGTTACCAAGATACACTCTACACACAATCCAAAAGACAATTCTACCGCGACTGCACCATTACTGGAACAATCGACTTTGTCTTTGGTGACGCAGTTGGAGTTTTCCAAAACTGCAAGCTCGTCGTTAGAAAACCAATGGCAACTCAACAATGCATGGTGACAGCAGGAGGAAGAACCAAAGTTGACAGTGTATCCGCCCTTGTTTTCCAAAACTGTCATTTCACCGGAGAACCCGAAGTTCTTACCTTGGAACCCAAGATAGCATATTTGGGAAGACCATGGAGGAATTTCTCCAAGGTTGTTATCATGGATTCTCTCATTGATGGTCTCTTTGTACCAGAGGGTTATATGCCATGGATGGGAAGTCTTTTCAAGGATACATGCACTTATCTGGAATACAACAACAAGGGTGATGGTGCTGCCACTAATCTTAGAGTGAAATGGCCAGGTGTTAAAACCATCTCTGCCGGTGAAGCTGCTAAATACTATCCAGGAAAGTTTTACGAAATTGCTAACGCAACTGCGCGTGATGATTGGATTACCGAATCTGGAATTCCTTATTCAATTGGAGCACAGCCAGCTGGACCCCTTCCAAGAGCTGCTTAA 1749 0.418 MAGGAIETQNHASKKKFAILGVSSILLIAMVAAVAVGIKDGGQVESEGDNQIAKSQKNVQMLCGTTEYKQTCEKSLAKTGNKDMKELIKQAFNATAEELVKQIHNSTLYKELATNDMTKQAMDICKEVLGYAVDDVHQSIHTLDKFDLSKIDEIAYDLKVWLSGTLANQQTCLDGFENTTTHAGQTMAKVLNASLELSNNALDIINGLSGFVKDLNLSSFARVLNNNRKLLSEDGLPSWVSESQRKLLAAPENVKPNVVVAQDGSGQFKTLTEALALVPKKNKVPFVIHVKAGIYKEYVAVDKHRDHVTIIGDGPKKTIFTGSKSYGDGVQTYNTATFSVNSAHFTALNVGFENSAGAAKHQAVALRVTADKALFYNCEMNGYQDTLYTQSKRQFYRDCTITGTIDFVFGDAVGVFQNCKLVVRKPMATQQCMVTAGGRTKVDSVSALVFQNCHFTGEPEVLTLEPKIAYLGRPWRNFSKVVIMDSLIDGLFVPEGYMPWMGSLFKDTCTYLEYNNKGDGAATNLRVKWPGVKTISAGEAAKYYPGKFYEIANATARDDWITESGIPYSIGAQPAGPLPRAA 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00739 582 ProSitePatterns Pectinesterase signature 2. 401 410 IPR033131 -
Mepo1g00739 582 Gene3D - 251 572 IPR012334 -
Mepo1g00739 582 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 209 IPR035513 -
Mepo1g00739 582 Pfam Pectinesterase 257 548 IPR000070 GO:0030599|GO:0042545
Mepo1g00739 582 SMART PMEI_2 54 204 IPR006501 GO:0004857
Mepo1g00739 582 SUPERFAMILY Pectin lyase-like 254 570 IPR011050 -
Mepo1g00739 582 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 209 IPR035513 -
Mepo1g00739 582 PANTHER PECTINESTERASE 26 562 - -
Mepo1g00739 582 Pfam Plant invertase/pectin methylesterase inhibitor 58 204 IPR006501 GO:0004857
Mepo1g00739 582 CDD PMEI-like_3 62 210 - -
Mepo1g00739 582 FunFam Pectinesterase 4 254 572 - -
Mepo1g00739 582 ProSitePatterns Pectinesterase signature 1. 282 301 IPR018040 -
Mepo1g00739 582 FunFam Pectinesterase 55 209 - -
Mepo1g00739 582 NCBIfam pectinesterase inhibitor domain 53 208 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00739 Mepo-Chr1 7044622 7046843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00739 14 577 Carbohydrate Esterase AT3G05610 45.645 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00739 K01051 - gmx:100800194 810.061