Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00727 ATGGGACAGGAATCAGATTCAAAAGCCAAGTTGGTGTTAGAAATTTGCTCCATTTCCACACGTTCTGCATCTTGTGTTCATAGGATTCCAACCAAGACAATTTTCATTGACTGGTATTGCATTCTTGGAGTAGAAGAAAATGCAGGAGTAAATACCATTCGCAAAAGATACCATAAACTTGCCTTACAACTTCACCCAGATAAAAACAAACATCCAAAAGCTGAAATTGCCTTCAAACTAGTTTCTGAGGCAAATGCATGTCTAACAAATGCAGCAAAGAGAGAAGCTTTCGACTTCGAGAGGTACAAGAATTTCTGCATTGAGTGCAAAAGAATTCCATATAAATCATCAGGCAATGTTTCTGTCAATTCCAGTGGTTCGGGTTTCAAGGCATGGAATATTATCACAAAAACAAGATCTTTTAAGTTTTGGAGAAATATTAAGGATATTAGAGAGAGATTCAATGAGGAGGCTAAGGTGGTTGAGAATTGTATGAGAGTAAATTCAATGTCAAGGAATGAATCTCCACTCTACAATCCAGATAGTTATCTACATAGAAGCAAGTCGCATAGATTTGAGAAAGAAACGCCTGTTTTCAATCCATCGGATTACTTGTACCAAGGCTATCCTCATATGAGAGGCCTTGTTAACAAGAATCCTTCCGCATTTTGGTATTTGCAGACTTCTAGTATGCTGCACAACGAAAAGAGAGGAGCGCAGCATAGCTCGCCTGTTTTTGAGGTCAAATCAAGGAGTATGTTTACAAACCAATTTGCTTTTGTACCATCAAGATATTAA 798 0.3784 MGQESDSKAKLVLEICSISTRSASCVHRIPTKTIFIDWYCILGVEENAGVNTIRKRYHKLALQLHPDKNKHPKAEIAFKLVSEANACLTNAAKREAFDFERYKNFCIECKRIPYKSSGNVSVNSSGSGFKAWNIITKTRSFKFWRNIKDIRERFNEEAKVVENCMRVNSMSRNESPLYNPDSYLHRSKSHRFEKETPVFNPSDYLYQGYPHMRGLVNKNPSAFWYLQTSSMLHNEKRGAQHSSPVFEVKSRSMFTNQFAFVPSRY 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00727 265 CDD DnaJ 37 84 IPR001623 -
Mepo1g00727 265 PRINTS DnaJ domain signature 39 57 IPR001623 -
Mepo1g00727 265 PRINTS DnaJ domain signature 73 93 IPR001623 -
Mepo1g00727 265 PRINTS DnaJ domain signature 110 129 IPR001623 -
Mepo1g00727 265 PRINTS DnaJ domain signature 57 72 IPR001623 -
Mepo1g00727 265 Pfam DnaJ domain 37 98 IPR001623 -
Mepo1g00727 265 SMART dnaj_3 36 93 IPR001623 -
Mepo1g00727 265 PANTHER BNAC03G44070D PROTEIN 20 194 - -
Mepo1g00727 265 SUPERFAMILY Chaperone J-domain 28 102 IPR036869 -
Mepo1g00727 265 ProSitePatterns Nt-dnaJ domain signature. 78 97 IPR018253 -
Mepo1g00727 265 Gene3D DnaJ domain 36 162 IPR036869 -
Mepo1g00727 265 ProSiteProfiles dnaJ domain profile. 37 101 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00727 Mepo-Chr1 6965790 6967125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00727 37 98 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 42.424 7.20e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00727 - - gmx:100801809 407.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00727 1 6965790 6967125 Mepo1g00727 1 6965790 6967125 ECH
Mepo1g00727 1 6965790 6967125 Mepo6g01439 6 15674686 15676321 PCT