Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00719 ATGGCGGTTTCAGCAGATATCAGAGGCATTTTAACCGCTTTCAATCCTTCTCTCGACTTCTTCGCTATTTCCGCCGGTGACGGTCGTATTAAGATATGGGATGCTCTCAAAGGTCAAGTTCAGACCGAGTTTGCAGACATTACTTCAACTCATGAGACCAATATATTTGATCAAAAAGGACATCTTTCTGTTGATTACACTTGTATCAAGTGGTCGTCTTTTCAAACAAAGAGGAAAAGGAAACATTCATCATCCTCATTGTTGCTGCTTGGAACTGGTAGTGGTGATGTTTTAGCACTTGATGTTTCTGCTGGTCAATTGTCCTGGAAAATCAATGATGGTCATCCTGGAGGTGTCAGAGCCATTTCGTCTTTGGCAAATGGATCAACCTTTTATACTGCAGGTGCGGATGGAATGGTATGCGCCATAGATTTCATGACAGGAAAACTGCTGGAGAAATTTAAAGTCTCATCAAAGGCAGTATCTTGTATATCAGTTTCCCCAGATGGGAAGAAGTTAGCTACTGCAGCAGCACAATTGAAGATTTTCAATTGTTCTAATAAAAAAAAGATTCAAAAATGCTCTGGTCATCCTGGATCTGTCCGGTGTATGGTCTTCACTGAAGATAGCAAGTATATCCTCTCATCTGCTGTTGGTGAAAGATATGTTGCTGTTTGGAGTATAGATGGATCTAAAAAGCAGTCAGCTAGCTGTGTTCTTGCAATGGAGCACCCTGCTGTCTTTCTTGATAGTAGGTGTATTGATAAAGGGGAACATGATGAGGCTGGCATATGTGTTTTGGCCATATCAGAAGTTGGTCTTTGTTATTTATGGTTTGGAAACAGTATTGAAGAACTACGAAATGCAAAACCCACAAAAATCTCATTATCTTTGGAAGACATGTCCACAAAAAATTACAAGGGTGCAGTCCCCGCAATATACGCTGCAAACTTACAAAGCACCCAGAAGCCGGCTTCTGGGCAGGTTTTTCTTGTTTACGGGATGCTTGTAAAACCATCATTTCAAAATATTTTAGTGCATTCCGGTGCAGATGTGAAGTTGAGTGTCTCCTGTGATGGCGTTCTTCTTCCAAAGAGCCAATCTCGTGTCAAATCTAAAAACAGGACAGATGTACAAAGAGTAACTGCCCTAGACCGTGCTAATGCCGAGGATGCCTTGCTTCCAATTCCTAAAGTTTTTGATTCCCGTGAGAAAGAGGAATCATTTCAAGACTCTTTGGACAAGGATGTGATGGTTGATTTGTTTACAAGTGTTATAGCTGATTCTATGGAGATAGATGATGGTATTGTGCAAAGTGAGACTAATATAATTAGCATGGAGGACCGGATGAGATCACTAGGATTGCTTTACAATGAGAGTGATTGTGCATCAAACTTTGAACTTTGTTCTAAATTGTTAAAGGGTATTGATCTAGAATCTACTCTTCCAAAGAAGAAGGTAAGAGCAGCTGTTTTGTCTATGGAACCAAGCGAAGCATTCAAGCTACTGGAAGTGTTGCTAGCTATATGGCAATCAAGGTCGGCTAGAAGAGAGTATGTGCTTCCATGGATGTATAGCATTTTAGTTACCCATGGTCATAATGCTGCTGAAGAATCTGCAACACATATGATTGATTCAGTGTACAAGATTACAAATTCCAGAGGGGCAACTCTTCAGTCTTTGTTGCAATTATCAGGTCGTCTACAACTGGTGACATCACAGATTGATAAGGCTTCTCAGAGAATAAGCCATTCGGTGCATGATATCCAAACAGAAGAAAGTGAAGACGAGGCTGAATTTTATCAAGAGGATGAAGATGGTGAAGAAGATGATGCATCTGAAATAAGTTCTGACAATGAAAACTAG 1866 0.4041 MAVSADIRGILTAFNPSLDFFAISAGDGRIKIWDALKGQVQTEFADITSTHETNIFDQKGHLSVDYTCIKWSSFQTKRKRKHSSSSLLLLGTGSGDVLALDVSAGQLSWKINDGHPGGVRAISSLANGSTFYTAGADGMVCAIDFMTGKLLEKFKVSSKAVSCISVSPDGKKLATAAAQLKIFNCSNKKKIQKCSGHPGSVRCMVFTEDSKYILSSAVGERYVAVWSIDGSKKQSASCVLAMEHPAVFLDSRCIDKGEHDEAGICVLAISEVGLCYLWFGNSIEELRNAKPTKISLSLEDMSTKNYKGAVPAIYAANLQSTQKPASGQVFLVYGMLVKPSFQNILVHSGADVKLSVSCDGVLLPKSQSRVKSKNRTDVQRVTALDRANAEDALLPIPKVFDSREKEESFQDSLDKDVMVDLFTSVIADSMEIDDGIVQSETNIISMEDRMRSLGLLYNESDCASNFELCSKLLKGIDLESTLPKKKVRAAVLSMEPSEAFKLLEVLLAIWQSRSARREYVLPWMYSILVTHGHNAAEESATHMIDSVYKITNSRGATLQSLLQLSGRLQLVTSQIDKASQRISHSVHDIQTEESEDEAEFYQEDEDGEEDDASEISSDNEN 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00719 621 SMART WD40_4 187 227 IPR001680 GO:0005515
Mepo1g00719 621 SMART WD40_4 104 144 IPR001680 GO:0005515
Mepo1g00719 621 SMART WD40_4 147 184 IPR001680 GO:0005515
Mepo1g00719 621 SMART WD40_4 4 34 IPR001680 GO:0005515
Mepo1g00719 621 ProSiteProfiles Trp-Asp (WD) repeats profile. 13 43 IPR001680 GO:0005515
Mepo1g00719 621 MobiDBLite consensus disorder prediction 581 621 - -
Mepo1g00719 621 Gene3D - 11 303 IPR015943 GO:0005515
Mepo1g00719 621 SMART ire1_9 123 155 IPR018391 -
Mepo1g00719 621 SMART ire1_9 81 112 IPR018391 -
Mepo1g00719 621 Pfam Dip2/Utp12 Family 482 572 IPR007148 -
Mepo1g00719 621 MobiDBLite consensus disorder prediction 592 621 - -
Mepo1g00719 621 SUPERFAMILY WD40 repeat-like 13 234 IPR036322 GO:0005515
Mepo1g00719 621 Pfam WD domain, G-beta repeat 11 34 IPR001680 GO:0005515
Mepo1g00719 621 Pfam WD domain, G-beta repeat 189 226 IPR001680 GO:0005515
Mepo1g00719 621 PANTHER OS03G0300300 PROTEIN 4 620 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00719 109 228 U-box Gene Family AT2G33340 29.032 4.78e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00719 K14546 - gmx:100815458 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00719 1 6866202 6876105 Mepo1g00719 1 6866202 6876105 ECH