Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo1g00711 | ATGATGAATCTAAGCAACAACGGAAAAGGATCAATTTCTACTGTTACTTCAACTGCTACTACTATGAAATCCGGTGAAGGTTCCGATCAGTTTCCGGCGGGTTTACGAGTTCTTGTTGTGGATGATGATCCCACGTGTCTTATGATTCTTGAGAAGATGTTGCGCACATGTCTCTATGAAGTAACGAAATGCAATCGAGCTGAGACTGCGCTTTCACTACTCAGAGAGAACAAGAATGGATTTGATATTGTTATTAGTGATGTGCATATGCCAGACATGGATGGATTTAAACTCTTAGAACATATTGGATTGGAAATGGACCTTCCAGTTATTATGATGTCTGCCGATGATGGTAAAAGTGTTGTTATGAAGGGTGTAACACACGGTGCTTGTGATTACTTGATTAAACCTGTTCGTATTGAGGCTTTGAAGAACATATGGCAGCATGTGGTTCGGAAGAAAAAGAATGAGTGGAAAGATACGGAGCAATCAGGCAGTGCTGATGAGGGAGATCGACATCCAAAGGCATCTGATGATGCCGATTATTCATCTTCTGCTAATGAAGGAAATTGGAGAAACTCCAGAAAGAGAAGGGATGATGAAGAGGAAGGTGACGATAGAGATGACTCGTCAACACTAAAGAAGCCTCGGGTTGTTTGGTCTGTCGAGCTCCATCAACAGTTTGTGGCTGCTGTGGATCAACTAGGAATTGACAAGGCTGTTCCCAAAAAAATTCTGGAATTAATGAATGTTCCTGGGCTCACTAGAGAAAATGTTGCCAGCCACTTGCAGAAATATCGATTGTATCTTCGAAGGCTGAGTGGAGTTTCTCAGCACCAGAATAATTCATTTCTCAGCCCACAAGAGGCGTCGTTTGGAACGATTTCGTCAATGAACGGACTTGACCTTCAAACTCTTGCAGCAGCTGGCCAGCTCCCAGCGCAAAGTCTAGCCACTCTTCAAGCAGCAGGACTTGGTAGGTCAACTGTGAAATCAGGCTTACCAATGCCTCTCATGGATCAAAGGAACCTTTTCAGTTTTGAAAACCCAAGGTTGAGATTTGGTGAAGGGCAACAGCAACTTTTGAATGGTAATAATAATAAACCAACAAATCTTCTTCACGGAGTTCCTACTAACATGGAGCCAAAGCAACTCGCCAATTTGCATCAGTCTGCAGCACAATCCCTCAGCAACATGAATATGCGAGTCCCCGCTTCTGCTACACAGGGAAATCCCTTATTGATGCAGATGGCACAATCCCAACCTAGAGGTCCAATGCTAAGTGAAAATACTGGTTCTCATGTTCCAAGATTACCGAACCTCTTGGGGCAGTCTACTGTGTCAAATGGAATTTCTGACGGTCTTATGGGGAGAAACAACATGGCTAGTAGCAGTAGAGCGCCTTCGTTTAATCCTGTTCCACAGAGCTCTTCATTTTTGAATTTTCCCATGAATCAAAGCACTGAAATGTCTGTTAGTAATTTCCCTCTCGGAAGCACTCCAGGTATATCTAGTATCACAACCAAAGGCTCATTTCAAGCCGAAGTTAATTCGGGAATTAAAGGATCAGCTGGATTTCCAAGTTATGATATTTTTAACGAACTGAACCATCAGAAATCCCGGGATTGGGGGATGACAAACCAAGGTCTAACGTATGATTCCTCATCGCATGCAAATCCTTTACATGGCAACATCGATGTCTCTCCGTCGGTTTTAGTCCATCAGGGCTTTTCTTCTGCTCAACAAACCGGACATAGCAGAGATGCTTCTTTGCTTGGAAAATCTCCTTTCTCTCTTGGAGAAGGCTTGGAACAAGTTAATCTCCAAAATGGTGGCGTTCAACATTTCAATCCTCTTTATGTTGAAAATTCAACAAGGGTTAAGGCTGAAAGAGTTCCTGACGCGAGCTCCCATACTAACCTCTTCCCTGATCATTTCGGGCAGGATGATCTCATGAGTGCACTTCTGAAACAGCAGGAAGGCATTGGACAAGGCGAGAATGAGTTTGATTTTGACGGGTATTCTCTGGACAACATTCCTGTCTAG | 2046 | 0.4335 | MMNLSNNGKGSISTVTSTATTMKSGEGSDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKSVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKKKNEWKDTEQSGSADEGDRHPKASDDADYSSSANEGNWRNSRKRRDDEEEGDDRDDSSTLKKPRVVWSVELHQQFVAAVDQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQNNSFLSPQEASFGTISSMNGLDLQTLAAAGQLPAQSLATLQAAGLGRSTVKSGLPMPLMDQRNLFSFENPRLRFGEGQQQLLNGNNNKPTNLLHGVPTNMEPKQLANLHQSAAQSLSNMNMRVPASATQGNPLLMQMAQSQPRGPMLSENTGSHVPRLPNLLGQSTVSNGISDGLMGRNNMASSSRAPSFNPVPQSSSFLNFPMNQSTEMSVSNFPLGSTPGISSITTKGSFQAEVNSGIKGSAGFPSYDIFNELNHQKSRDWGMTNQGLTYDSSSHANPLHGNIDVSPSVLVHQGFSSAQQTGHSRDASLLGKSPFSLGEGLEQVNLQNGGVQHFNPLYVENSTRVKAERVPDASSHTNLFPDHFGQDDLMSALLKQQEGIGQGENEFDFDGYSLDNIPV | 681 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo1g00711 | 681 | FunFam | Two-component response regulator | 211 | 274 | - | - | |
Mepo1g00711 | 681 | MobiDBLite | consensus disorder prediction | 155 | 179 | - | - | |
Mepo1g00711 | 681 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 214 | 271 | IPR017930 | - | |
Mepo1g00711 | 681 | Gene3D | - | 212 | 274 | - | - | |
Mepo1g00711 | 681 | MobiDBLite | consensus disorder prediction | 155 | 212 | - | - | |
Mepo1g00711 | 681 | Pfam | Myb-like DNA-binding domain | 217 | 267 | IPR001005 | - | |
Mepo1g00711 | 681 | Gene3D | - | 35 | 206 | - | - | |
Mepo1g00711 | 681 | FunFam | Two-component response regulator | 35 | 172 | - | - | |
Mepo1g00711 | 681 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 35 | 365 | IPR045279 | GO:0009736 | |
Mepo1g00711 | 681 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 215 | 268 | IPR006447 | GO:0003677 | |
Mepo1g00711 | 681 | ProSiteProfiles | Response regulatory domain profile. | 36 | 151 | IPR001789 | GO:0000160 | |
Mepo1g00711 | 681 | Pfam | Response regulator receiver domain | 37 | 145 | IPR001789 | GO:0000160 | |
Mepo1g00711 | 681 | SUPERFAMILY | Homeodomain-like | 212 | 272 | IPR009057 | - | |
Mepo1g00711 | 681 | SUPERFAMILY | CheY-like | 34 | 156 | IPR011006 | - | |
Mepo1g00711 | 681 | CDD | REC_typeB_ARR-like | 37 | 151 | - | - | |
Mepo1g00711 | 681 | MobiDBLite | consensus disorder prediction | 191 | 212 | - | - | |
Mepo1g00711 | 681 | SMART | REC_2 | 35 | 147 | IPR001789 | GO:0000160 | |
Mepo1g00711 | 681 | PIRSF | RR_ARR_type-B | 15 | 673 | IPR017053 | GO:0003677|GO:0003700|GO:0009736 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo1g00711 | Mepo-Chr1 | 6813326 | 6817546 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo1g00711 | 70 | 681 | Response Regulator Gene Family | AT3G16857 | 51.756 | 0.0 | 537 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-ARR-B | Mepo1g00711 | Response_reg | 6.1e-23 | CL0304 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo1g00711 | - | K14491 | gmx:100781102 | 1094.72 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mepo1g00711 | 1 | 6813326 | 6817546 | Mepo1g00711 | 1 | 6813326 | 6817546 | ECH | |
Mepo1g00711 | 1 | 6813326 | 6817546 | Mepo6g01415 | 6 | 15381576 | 15385032 | PCT |