Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00705 ATGGTGGTTGATCACAGTGATAAGGTATCAGAAGGTGAAGATTCAAACCCTAACGCCGCCGTTTCATCAGATAACAACAATCCAAAGAAAACCTGTGCTGATTGCGGAACTTCCAAAACTCCTCTATGGCGTGGTGGTCCTGCTGGTCCAAAGTCACTGTGCAATGCTTGCGGGATCAGGAGCAGGAAGAAGAAGAGAGCGATATTAGGGATAAGCAAAGGAAACAACGAAGAAGGAACGAGAAAGGGGAAAAAGAGTAACAGTGGCGGCGGCGGAAGCAAAGTTGGTGATAATTTGAACATGAAGCAGAGATTATTGAATTTAGGGAAAGAAGTGTTTATGAATCGATCGCATTGGAAGAAACTGGGAGAAGATGAACAAGCTGCTGTGTTGTTGATGTCTCTTTCTTATGGATCTGTTTATGCCTAA 429 0.4382 MVVDHSDKVSEGEDSNPNAAVSSDNNNPKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKKRAILGISKGNNEEGTRKGKKSNSGGGGSKVGDNLNMKQRLLNLGKEVFMNRSHWKKLGEDEQAAVLLMSLSYGSVYA 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00705 142 PANTHER OS01G0976800 PROTEIN 13 142 - -
Mepo1g00705 142 MobiDBLite consensus disorder prediction 13 34 - -
Mepo1g00705 142 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 26 66 - -
Mepo1g00705 142 Pfam GATA zinc finger 32 66 IPR000679 GO:0006355|GO:0043565
Mepo1g00705 142 MobiDBLite consensus disorder prediction 1 48 - -
Mepo1g00705 142 CDD ZnF_GATA 31 81 IPR000679 GO:0006355|GO:0043565
Mepo1g00705 142 ProSitePatterns GATA-type zinc finger domain. 32 57 IPR000679 GO:0006355|GO:0043565
Mepo1g00705 142 ProSiteProfiles GATA-type zinc finger domain profile. 26 62 IPR000679 GO:0006355|GO:0043565
Mepo1g00705 142 Gene3D - 27 90 IPR013088 GO:0006355|GO:0008270
Mepo1g00705 142 SMART GATA_3 26 85 IPR000679 GO:0006355|GO:0043565
Mepo1g00705 142 MobiDBLite consensus disorder prediction 68 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00705 Mepo-Chr1 6758886 6759936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00705 2 142 C2C2-Gata Transcription Factor Family AT5G49300 54.362 8.85e-44 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mepo1g00705 GATA 1.4e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00705 - - aprc:113847917 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00705 1 6758886 6759936 Mepo1g00705 1 6758886 6759936 ECH