Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00701 ATGTCCTCCTATTCGTTGAGAAACTATTGCCAAGGTTTGTTGAGATGTGGAAAGAGTTGCAGACTGAGATGGATAAACTACTTAAGATCAGATGTGAAGAGAGGTAACATCACTCCTCAGGAGGAAGAAATCATTGTCAAGTTGCATGCTGTTCTTGGTAACAGGTGGTCTGTAATAGCTGGACATTTACCAGGACGTACAGATAATGAGATAAAAAATTATTGGAACTCTCATTTAAGGAGAAAGATTTACTGTTTCATGAAGTCATTAAATGAGTCATTTTCACCAATTGACTTAGCTGCTGTTAACCTAGCAGCTGCTTCCAAGAGAAGAGCTGGTAGAGGAGCTGCACCAAGGCAAGATCAGAACAACAAGAAAGAGGTTCTTGAAGTTCAATTACCAACACTACATACAAGAAAAGAAAAAGAGCTACAACAAGGTTATAATAATATTAATGATTATGATACAACTAATTCATCATGCCCTAATATGAACGAATTAGTTGACACTTTGGGACCATATGAATGGTTAGATGATGAAATTATTAAACTAAGTTACATGTTTGAAAGTGGAGTACTTGTTAGTCCAGATCATGAGAATAATAATAATAATATTAATGTAACCAATGATGATAATATTCTAGATTCTGATTTTGGTGTACTAGTGGGAAATAATGATGGTGGTAGTGGTGGTGTTTGGAGTTCATCAAATGGTGCTGAAAGTGGGGAGTGTAATTCTTCTGTGAATTCTGTTTATGAATATCAGTGGCCTGATATGCATTTAGAAGGTAGTTGTGTTCAATCCTACAATCAACAATGGGACCTTTGTGATCAACAAGGCCAAGATGCTAATTGCTTCTGGGATACTTCCAATTACCAAGAAAGTGGCTTTTATCACTGA 900 0.3622 MSSYSLRNYCQGLLRCGKSCRLRWINYLRSDVKRGNITPQEEEIIVKLHAVLGNRWSVIAGHLPGRTDNEIKNYWNSHLRRKIYCFMKSLNESFSPIDLAAVNLAAASKRRAGRGAAPRQDQNNKKEVLEVQLPTLHTRKEKELQQGYNNINDYDTTNSSCPNMNELVDTLGPYEWLDDEIIKLSYMFESGVLVSPDHENNNNNINVTNDDNILDSDFGVLVGNNDGGSGGVWSSSNGAESGECNSSVNSVYEYQWPDMHLEGSCVQSYNQQWDLCDQQGQDANCFWDTSNYQESGFYH 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00701 299 Gene3D - 38 83 - -
Mepo1g00701 299 CDD SANT 38 79 IPR001005 -
Mepo1g00701 299 FunFam Myb transcription factor 38 83 - -
Mepo1g00701 299 ProSiteProfiles Myb-like domain profile. 29 79 IPR001005 -
Mepo1g00701 299 SMART sant 33 81 IPR001005 -
Mepo1g00701 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 83 IPR017930 -
Mepo1g00701 299 SUPERFAMILY Homeodomain-like 15 84 IPR009057 -
Mepo1g00701 299 Pfam Myb-like DNA-binding domain 34 79 IPR001005 -
Mepo1g00701 299 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 11 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00701 Mepo-Chr1 6710263 6713419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00701 12 184 MYB Transcription Factor Family AT5G49330 46.961 1.14e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo1g00701 Myb_DNA-binding 9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00701 K09422 - gmx:100805532 317.775