Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00694 ATGATGATGATGGCAAATAACTTACCGGGTCAACTTGTTGGATCAGAGATACATGGATTCCACACATTGCAAGACCTGGATGTTGCGAGCATTATGGAGGAAGCAAGAACAAGATGGCTTCGTCCCAATGAAATTCATGCCATGCTTTCTAATCACAAGTATTTTACCATCAATGTCAAGCCAATGAATTTGCCTAAAAGTGGTACTATTGTATTGTTTGACCGCAAGATGCTTCGGAACTTTCGAAAAGATGGGCACAACTGGAAAAAGAAAAAGGATGGAAAAACTGTTAAAGAAGCTCATGAGCACTTAAAAGTTGGTAATGAAGAAAGGATCCATGTATATTATGCACATGGTCTGGATAACCCAAATTTTGTTCGTAGATGTTATTGGCTGCTTGACAAGAGCCTGGAACACATCGTCCTTGTTCATTACCGTGAAACACAAGAGTTTCAGGGTTCTCCCATCACTCCCGTAAATTCAAACTCTACTACTGCCTCTGACCCATCTGCACCATGGATTTTGTCAGAAGAAATAGATTCAGGGACCAAAACTGCATATGCTGGTGAGATTAATGAAAATATAACAGTCAAAAGCCATGAACTGAGGCTTCACGAGCTTAATACACTTGAATGGGACGACCTAGTCGTAGCAAACGATCTTAACACCTCTGCTGTGCCTAATGGAGGAAAAGTTCCCTATTTTGATCAACAAAATCAAATTTTACTGAATGACAGTTTTAGCAATGTAGCCAACAATGCATCTGCAGAAATTCGTACGTTCAATAATTTAACCCAGCCAATTGCAGTGAGCAATAGTATTCCATACAATTTTTCAGAAAGTGTTACTCTTCAGACAATTAGCAATCAAGGATATCAAAATGAGCAGAGGAACCATCCCGTCTCTTCAAGTGGTGTTGATTCCTTAAACACTTTGGTCAATGACAGATTGCAAAGTCAGGACAGCTTTGGAATGTGGGTGAACCAAATCATGTCTGATTCCCCTTGTTCAGTTGATGATTCTGCTCTTGGATCCTCAGTTTCATCCGTTAATGAACCGTATTCATCTCTGGTAGTGGATAATCAGCAACTTTCCCTTCCAGAACAAGTATTTAATCTTACCGATGTGTCCCCTGCGTGGGTGTCTTCCACAGAGAAATCAAAGATCCTAGTGACTGGACTCTTTAATACAGACTATCTGCACCTCCCAAAGTCCAATCTAATGTGTGTATGTGGTGATGCAAGTGTTCCTGCAGAAATTGTTCAGGATGGGGTCTACCGTTGCTGGGTACCACCGCATTCTCCGGGATTTGTGAATCTCTACTTGAGCTTTGATGGCCATAACCCTATCAGCCAAGTTGTTACTTTTGAGTATCGCACTCCTGTTTTGCATGATCCAGTAGCTTCTATGGAAGAGAAGAACAACTGGGACGAGTTTCAACTTCAAATGAGGCTTTCTTATTTGCTCTTTGCTAAACAACAGAGTCTTGATGTCATCTCTAGTAAAGTATCACTTAGTAGACTAAAGGAGGCAAGGGAATTCTCCTTAAAGACATCATTTATTTCCAATACTTGGCAATACTTAATGAAGTCAACTTTAGACAACAAAATTCCATTTTCGCAAGCTAAAGATGCCCTGTTTGGAATTGCATTGAAAAACAGATTAAAGGAATGGCTTTCAGAAAAAATTGTTTTAGGATGCAAGATTACTGAATACGATGCGCAAGGACAAAGTGTCATCCATTTGTGTGCAATTTTGGAATATACGTGGGCAATTACTTTATTTTCATGGTCAGGCTTATCGCTAGATTTCCGGGATAAATTTGGATGGACTGCTCTTCACTGGGCAGCATATTACGGCAGGGAGAAAATGGTTGCAACTTTGTTGTCAGCTGGGGCAAAGCCAAACTTGGTCACGGATCCAACTCACCAAAACCCTGGTGGATGTACTGCCGCTGATCTTGCTTATACGAGGGGTTATCATGGCTTAGCAGCTTATCTTTCGGAAAAGTCTCTAGTTGAGCAGTTCAATGACATGAGCTTAGCTGGAAATATCAGCGGCTCACTGGAAACTAGTACGGATGATCCACTAAATTCCGAGAACCTTACCGAGGAGCAGCTCTATGTGAAAGATACACTGGCAGCTTACCGGACAGCTGCCGATGCAGCAGCACGCATACAAGAAGCATATAGGCAGCATTCCTTAAAGTTACAAACAGAGGCAGTTGAGTTTTCCAGCCCAGAAGCTGAAGCACGCAAAATAGTTGCAGCGATGAAGATTCAGCATGCCTTCCGCAATTTTGAGACAAAGAAAACGATGGCTGCTGCTGCTCGAATACAACATAGATTCCGCACATGGAAGATTCGTAGAGATTTTCTCAACATGCGCCGTCAAGCTATCAAGATTCAAGCTGCTTTCAGGTGCTTTCAACAACGGAAACAATATTGTAAAATCATTTGGTCAGTTGGCGTGGTTGAGAAAGCAGTGTTGCGTTGGCGTTTAAAGAGAAAGGGCTTCCGTGGGCTCCGGATTAATACCGAGGAAGAATCGGGAGATCAGAATCAGCAAAGTGATGCAGAGGAGGAATTCTTTCGGACTGGTAGGAAACAAGCCGAAGAACGTGTCGAGAGAAGTGTAATACGAGTGCAGGCTATGTTCCGTTCTAAGAAAGCGCAAGAAGATTACAGGAGGATGAAGTTGGCCCTTAATCAAGCAAAGCTGGAACGGGAATATGAAAAAATGCTTAGTAATGAAGTTGACATGAAAATGAAGAGGTAG 2778 0.4197 MMMMANNLPGQLVGSEIHGFHTLQDLDVASIMEEARTRWLRPNEIHAMLSNHKYFTINVKPMNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGLDNPNFVRRCYWLLDKSLEHIVLVHYRETQEFQGSPITPVNSNSTTASDPSAPWILSEEIDSGTKTAYAGEINENITVKSHELRLHELNTLEWDDLVVANDLNTSAVPNGGKVPYFDQQNQILLNDSFSNVANNASAEIRTFNNLTQPIAVSNSIPYNFSESVTLQTISNQGYQNEQRNHPVSSSGVDSLNTLVNDRLQSQDSFGMWVNQIMSDSPCSVDDSALGSSVSSVNEPYSSLVVDNQQLSLPEQVFNLTDVSPAWVSSTEKSKILVTGLFNTDYLHLPKSNLMCVCGDASVPAEIVQDGVYRCWVPPHSPGFVNLYLSFDGHNPISQVVTFEYRTPVLHDPVASMEEKNNWDEFQLQMRLSYLLFAKQQSLDVISSKVSLSRLKEAREFSLKTSFISNTWQYLMKSTLDNKIPFSQAKDALFGIALKNRLKEWLSEKIVLGCKITEYDAQGQSVIHLCAILEYTWAITLFSWSGLSLDFRDKFGWTALHWAAYYGREKMVATLLSAGAKPNLVTDPTHQNPGGCTAADLAYTRGYHGLAAYLSEKSLVEQFNDMSLAGNISGSLETSTDDPLNSENLTEEQLYVKDTLAAYRTAADAAARIQEAYRQHSLKLQTEAVEFSSPEAEARKIVAAMKIQHAFRNFETKKTMAAAARIQHRFRTWKIRRDFLNMRRQAIKIQAAFRCFQQRKQYCKIIWSVGVVEKAVLRWRLKRKGFRGLRINTEEESGDQNQQSDAEEEFFRTGRKQAEERVERSVIRVQAMFRSKKAQEDYRRMKLALNQAKLEREYEKMLSNEVDMKMKR 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00694 925 SUPERFAMILY E set domains 372 459 IPR014756 -
Mepo1g00694 925 ProSiteProfiles CG-1 DNA-binding domain profile. 28 154 IPR005559 GO:0003677
Mepo1g00694 925 SUPERFAMILY Ankyrin repeat 549 670 IPR036770 -
Mepo1g00694 925 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 27 902 - -
Mepo1g00694 925 SMART CG_1_2 31 149 IPR005559 GO:0003677
Mepo1g00694 925 FunFam calmodulin-binding transcription activator 5 538 678 - -
Mepo1g00694 925 Coils Coil 888 908 - -
Mepo1g00694 925 ProSiteProfiles IQ motif profile. 795 819 IPR000048 GO:0005515
Mepo1g00694 925 Gene3D - 538 677 IPR036770 -
Mepo1g00694 925 Gene3D Immunoglobulins 367 462 IPR013783 -
Mepo1g00694 925 ProSiteProfiles Ankyrin repeat region circular profile. 608 636 - -
Mepo1g00694 925 ProSiteProfiles Ankyrin repeat profile. 608 640 IPR002110 GO:0005515
Mepo1g00694 925 Pfam CG-1 domain 34 147 IPR005559 GO:0003677
Mepo1g00694 925 Gene3D - 769 819 - -
Mepo1g00694 925 ProSiteProfiles IQ motif profile. 772 801 IPR000048 GO:0005515
Mepo1g00694 925 Pfam IPT/TIG domain 373 458 IPR002909 -
Mepo1g00694 925 Pfam Ankyrin repeats (3 copies) 565 637 IPR002110 GO:0005515
Mepo1g00694 925 SMART iq_5 771 793 IPR000048 GO:0005515
Mepo1g00694 925 SMART iq_5 794 816 IPR000048 GO:0005515
Mepo1g00694 925 SMART iq_5 874 896 IPR000048 GO:0005515
Mepo1g00694 925 SMART ANK_2a 647 678 IPR002110 GO:0005515
Mepo1g00694 925 SMART ANK_2a 608 637 IPR002110 GO:0005515
Mepo1g00694 925 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 714 822 IPR027417 -
Mepo1g00694 925 ProSiteProfiles IQ motif profile. 876 904 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00694 Mepo-Chr1 6662271 6670043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00694 31 908 CAMTA Transcription Factor Family AT3G16940 54.659 0.0 944
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Mepo1g00694 CG-1 4.2e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00694 K21596 - gmx:100793970 1525.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00694 1 6662271 6670043 Mepo1g00694 1 6662271 6670043 ECH
Mepo1g00694 1 6662271 6670043 Mepo6g01396 6 15132971 15139785 PCT