Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00666 ATGGCGAATTCTTCAACAACAGCATTTTCAGGTGAGATTCCAAACAAGAAGAACAAGGGAAGTTGTGTAATCAATTTCCCTTTCTCACCTGCTTTACCATCATGCAGCATCTTTGACATGATCCCACCATCACAATCTGATGATCAACAATCTTCTTCCTTTGCTGGTTACATCGATTTGTTGAGTACAAATGATTTCACTTCTTCTTCTACTTTATTCGATTGGTTTCCCACCATTGATGCTGACATGTCAGCACCACCTGCCACCACCCAGCTGCCTCCTTTACCGGTACCATCGCCTGCTGCGTCTGAGGTCTTGAATAATCCGGCCACCCCTGTCTCCCTTTCTTCTTCAATTTCTTCATCTTCCAATGAAGCTGGTACTGTTGCAGACAAAGTAACAGCAGCAGAGAATGAACATGAAGAAGAAGAAGAAGAACTTGAAGGAGATGAAGCAGAAGAGAAAGATGAAGATCATGGAATCAGACTTGTAGAGAATCAAAATGATCAAGATCAGATGAAGAAACAGTTGAAGCCAAAGAAGAAGAAGAACAAGAAGCTAATTAGACCAGCAAGAGTTACTTTCAAGACAAAGAGTGATGTTGATCACTTGGATGATGGTTATAGGTGGCGCAAATATGGCCAAAAACCAGTCAAAAACAGCCCATTTCCCAGGAGCTACTACCGTTGCACTGCCGCGAGCTGTGAGGTTAAGAAGCGTATAGAGCGTTCGGCTGCAGACTCTTCGATCGTGCTAACCAGCTATGAAGGCCAACACACCCACCTATCTCCGGTTCTATTGCGTGCTGCTAACCTTGGGATCATGCCTGATGCTTCTGGTTTCCAAGAACAGGTCCACCAACATCACAACACAACTAGCGGTGTCGTTGGTAGTTCTGTTCTTGGAAACGAATTTGCGATGTCTCAATCACAACAATATCAAAGATTTCAGGATCAGAATCAGAATGTGCTTCATCAGCAGCGGCAAGCATTGCCATCTTTGTTATATAATAGTGATTATAACAACTCCTTCAACATTTCTCCACTTTTGAATGTTGTTAACTCTGCTGATAATTTGATGAACTCTTCAACATCTTTTGGTGGATTTCTTCAAAATCAAGACAATTATGGTGGAGGCAATTCTTCTGTGTCTTCTTCTATGATGACAAGTACTAATGACATGGTGAGAAACAATGGACTTCTTCAGGATATGATTGCTCCGATGGAGATGGGAGGAGCTGGAGCCAAAGAATGA 1254 0.425 MANSSTTAFSGEIPNKKNKGSCVINFPFSPALPSCSIFDMIPPSQSDDQQSSSFAGYIDLLSTNDFTSSSTLFDWFPTIDADMSAPPATTQLPPLPVPSPAASEVLNNPATPVSLSSSISSSSNEAGTVADKVTAAENEHEEEEEELEGDEAEEKDEDHGIRLVENQNDQDQMKKQLKPKKKKNKKLIRPARVTFKTKSDVDHLDDGYRWRKYGQKPVKNSPFPRSYYRCTAASCEVKKRIERSAADSSIVLTSYEGQHTHLSPVLLRAANLGIMPDASGFQEQVHQHHNTTSGVVGSSVLGNEFAMSQSQQYQRFQDQNQNVLHQQRQALPSLLYNSDYNNSFNISPLLNVVNSADNLMNSSTSFGGFLQNQDNYGGGNSSVSSSMMTSTNDMVRNNGLLQDMIAPMEMGGAGAKE 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00666 417 Gene3D WRKY domain 189 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo1g00666 417 ProSiteProfiles WRKY domain profile. 199 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g00666 417 SMART WRKY_cls 204 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g00666 417 Pfam WRKY DNA -binding domain 205 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g00666 417 SUPERFAMILY WRKY DNA-binding domain 197 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo1g00666 417 MobiDBLite consensus disorder prediction 138 154 - -
Mepo1g00666 417 MobiDBLite consensus disorder prediction 87 186 - -
Mepo1g00666 417 FunFam WRKY transcription factor 57 190 264 - -
Mepo1g00666 417 Coils Coil 126 157 - -
Mepo1g00666 417 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 108 307 IPR044810 GO:0003700
Mepo1g00666 417 MobiDBLite consensus disorder prediction 104 129 - -
Mepo1g00666 417 MobiDBLite consensus disorder prediction 155 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00666 Mepo-Chr1 6385860 6387899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00666 170 280 WRKY Transcription Factor Family AT2G47260 65.766 3.10e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo1g00666 WRKY 4.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00666 - - mtr:11409051 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00666 1 6385860 6387899 Mepo1g00666 1 6385860 6387899 ECH
Mepo6g01347 6 14681442 14683694 Mepo1g00666 1 6385860 6387899 PCT