Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00663 ATGAATTACAACCACCGTCGCAGTCCTGGTGGTTTCCGCCCCGCCCCTCTCCACCGCAGCAACTTTGATAGTCCCCCGCGGTGGTCTCCGGGTAGGGTTGGTGGTGGTTTTCGTCCACCACCTGCCGGAGATGGCTTCAGACCGGTGGGTGGTGATGAATTTGGATTCAACCTGCCACCACCGCCGTTGTCTGGTCAGAAACGTGGGTTTCCGTTCTCTGGTCGTGGTGCTTCACCGGATCATTGTGATGGTGGAAATTTTGCTAAACTTTTTGTTGGGTCTGTTCCCCGAACAGCAACTGAGGATGATATTCGTCCTTTGTTTGAGGAACACGGGAATGTGGTTGAGGTCGCCCTGATCAAAGATAGAAAGACAGGACAGCATCAAGGTTGTTGTTTTATAAAGTATGCTACCTCAGAGGAAGCTGATCAGGCAATTAGAGCATTGCACAATCGACATACTCTTCCCGGAGGTGTTGGTCCCATCCAGGTGCGGTATGCTGATGGCGAACGGGAACGTCTTGGTGCAGTTGAGTACAAACTATTCGTGGGCTCTCTGAACAAACAGGCCAGTGTAAAGGAAGTCGAGGAAGTTTTCTCAAAATATGGACGGATTGAAGATGTTTATCTTATGCGTGATGACCAGAAGCAGAGTCGTGGATGCGGTTTTGTCAAATACTCTCATAGAGATATGGCACTGGCAGCTATTAATGCACTTAATGGAATATATACAATGAGAGGTTGTGAACAACCACTGATTGTCCGGTTCGCTGATCCTAAGAGACCTCGTCAAGGAGATTCCAGGGGTCCTGCATTTGGATCTGCAGGATTTGGTCCAAGATTGGATTCACCAGGCACTAGACTTCCATCAAATAATTCTGATCCTATGGGTGATCATATTCCTCCCCCTAATGCTTGGCGTCCAATCCCTCAACCAAATACTGGGACATCCTTCAATGCTGGTTTTCATGGCATGGGGCCTCCATCGATTCCAAGATCTGGGGACATGGCATTGCCTATAAATGCAGGTGGTCCTATGACTGGCATGGGAGTCTCCATAGATGGTCGTTTTCAAACTCAGTCTCCGTCAGCAATGCCGCAACAGAATTTCAACCAGCCTCCACCACAAATTCCACCGGTCAATCAACAAATACCTCCATCACAGAAACCTATTCAATCATCTCAGGAGTTTCCACCTTCACACCAGTTATATCCTCAAGCTCCGATTCCCTATCCACAAACATCCACACGTCCATCTTTCAGGCAGCATGGTCAGCCACAACCTCTCCCTGCTGGTCCACAGGGATTGGGCATAAATGCACAGTTTTCAGTTTCTCAGCCTCAAACTCAGCAGGGTGTTTTGTCTGCTACGTTTCCTCAGACCTCTCTTGATACCAACATGCAATCTAATACCGCATTGACTACTCCAAGTCAACAGCAAATTCCTCCTTCTATGCAGCAGCAGCATCATCCACTTCAACCTCTTCAACAATCCCCTTCTCAGTTAGCTCAATTGTTGTCACAACAAACACAGACGTTACAAGCAAGCTTTCATTCATCTCAGCAGGCCTTCTCCCAGCTTCAACAACAATTACAGATGATGCAACCATCCAGTCAAGCATCGCCATTGCAGCATCATGCAGAAGCTGCTAAAACACAGTCTCAATGGGGTGGGACTGTATCACATGCAGCGACCGGCACTCATGTAGCTGCACCTGCTGCAGGTGTTCCTTCATCAACACCTGCTACTTCTTCTGTACAACCAATAAGCCAGAACACAACTCTTGGAAATTGTAATTGGACAGAGCATCTATCTCCCGAGGGCTTCAAATACTACTATAATAGTGTAACTGGGGAAAGTCGGTGGGAGAAACCCGAAGAGTTGACATCATTTGAACAGCAAAAGCAACTGCTCAATCAGTCTGTTCAGCAGTCTCAAATTCAGGGACAGCCTTCAATACCACCCACCCAGCAAGTTGCACAAAACCAACAGGTTCAGCCTCAAAGTCATTTCCGAGGACAAGTTCACCATCAACAAATACAGCAGCCTTCGTCGTTCCAGGCATATGGAGTTACAGGTCATCAAAATGTTCAGGAACTTGGCTATAAACAGTTACAGACATCATTTGTTTCTGCTGGTGATCCTGGACGTTATTCACAGGGTATCAATAATACACAAGAGCTAATGTGGAAAAACAGGCCTACAGGAGTCTGA 2214 0.4734 MNYNHRRSPGGFRPAPLHRSNFDSPPRWSPGRVGGGFRPPPAGDGFRPVGGDEFGFNLPPPPLSGQKRGFPFSGRGASPDHCDGGNFAKLFVGSVPRTATEDDIRPLFEEHGNVVEVALIKDRKTGQHQGCCFIKYATSEEADQAIRALHNRHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASVKEVEEVFSKYGRIEDVYLMRDDQKQSRGCGFVKYSHRDMALAAINALNGIYTMRGCEQPLIVRFADPKRPRQGDSRGPAFGSAGFGPRLDSPGTRLPSNNSDPMGDHIPPPNAWRPIPQPNTGTSFNAGFHGMGPPSIPRSGDMALPINAGGPMTGMGVSIDGRFQTQSPSAMPQQNFNQPPPQIPPVNQQIPPSQKPIQSSQEFPPSHQLYPQAPIPYPQTSTRPSFRQHGQPQPLPAGPQGLGINAQFSVSQPQTQQGVLSATFPQTSLDTNMQSNTALTTPSQQQIPPSMQQQHHPLQPLQQSPSQLAQLLSQQTQTLQASFHSSQQAFSQLQQQLQMMQPSSQASPLQHHAEAAKTQSQWGGTVSHAATGTHVAAPAAGVPSSTPATSSVQPISQNTTLGNCNWTEHLSPEGFKYYYNSVTGESRWEKPEELTSFEQQKQLLNQSVQQSQIQGQPSIPPTQQVAQNQQVQPQSHFRGQVHHQQIQQPSSFQAYGVTGHQNVQELGYKQLQTSFVSAGDPGRYSQGINNTQELMWKNRPTGV 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00663 737 MobiDBLite consensus disorder prediction 259 318 - -
Mepo1g00663 737 Gene3D - 174 267 IPR012677 -
Mepo1g00663 737 ProSitePatterns WW/rsp5/WWP domain signature. 600 625 IPR001202 GO:0005515
Mepo1g00663 737 FunFam Flowering time control protein FCA 175 265 - -
Mepo1g00663 737 MobiDBLite consensus disorder prediction 353 367 - -
Mepo1g00663 737 MobiDBLite consensus disorder prediction 349 439 - -
Mepo1g00663 737 PANTHER RNA BINDING PROTEIN 41 536 - -
Mepo1g00663 737 SUPERFAMILY RNA-binding domain, RBD 179 278 IPR035979 GO:0003676
Mepo1g00663 737 SUPERFAMILY RNA-binding domain, RBD 73 173 IPR035979 GO:0003676
Mepo1g00663 737 Gene3D - 579 648 - -
Mepo1g00663 737 SUPERFAMILY WW domain 599 632 IPR036020 GO:0005515
Mepo1g00663 737 MobiDBLite consensus disorder prediction 368 385 - -
Mepo1g00663 737 MobiDBLite consensus disorder prediction 1 47 - -
Mepo1g00663 737 Pfam WW domain 599 625 IPR001202 GO:0005515
Mepo1g00663 737 SMART ww_5 595 627 IPR001202 GO:0005515
Mepo1g00663 737 MobiDBLite consensus disorder prediction 528 559 - -
Mepo1g00663 737 MobiDBLite consensus disorder prediction 466 498 - -
Mepo1g00663 737 MobiDBLite consensus disorder prediction 643 669 - -
Mepo1g00663 737 MobiDBLite consensus disorder prediction 386 423 - -
Mepo1g00663 737 CDD WW 597 627 IPR001202 GO:0005515
Mepo1g00663 737 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 181 248 IPR000504 GO:0003723
Mepo1g00663 737 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 90 153 IPR000504 GO:0003723
Mepo1g00663 737 Gene3D - 83 173 IPR012677 -
Mepo1g00663 737 MobiDBLite consensus disorder prediction 571 598 - -
Mepo1g00663 737 FunFam flowering time control protein FCA isoform X2 82 174 - -
Mepo1g00663 737 ProSiteProfiles WW/rsp5/WWP domain profile. 600 627 IPR001202 GO:0005515
Mepo1g00663 737 SMART rrm1_1 89 165 IPR000504 GO:0003723
Mepo1g00663 737 SMART rrm1_1 180 255 IPR000504 GO:0003723
Mepo1g00663 737 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 179 259 IPR000504 GO:0003723
Mepo1g00663 737 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 88 169 IPR000504 GO:0003723
Mepo1g00663 737 MobiDBLite consensus disorder prediction 577 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00663 Mepo-Chr1 6350378 6362417 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00663 86 265 Eukaryotic Initiation Factors Gene Family AT1G71770 26.020 5.02e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00663 - - tpra:123920645 1084.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00663 1 6350378 6362417 Mepo1g00663 1 6350378 6362417 ECH