Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00647 ATGAATGTTTTTCTGTTTGTAGTCCAGTTCCTATGTTTCTTTCTATTAACTACAACAACTTCATTGTTCATTAAAGCTTCTGAAATAAATGTTGAAAGTTATGAAACTGATAGAATAATTGATCTACCAGGACAACCTTCAAACCCATCAGTTTCACACTTTTCAGGTTACATCAATGTCAATGAAGATCATGGGAGGGCCCTTTTCTATTGGTTCTTTGAAGCTCAATCTCAACCCTCCAATAAACCTCTCCTTCTCTGGCTCAATGGAGGACCTGGATGCTCCTCAATTGGATATGGTGCTGTTGTTGAGATAGGACCTCTTTTAGTCAACCAAAATGGAGAAGGACTAAAATTCAACCCATACTCTTGGAATCAAGAAGCAAATTTGTTATTTGTGGAGTCCCCTGTTGGAGTTGGTTTTTCTTACACCAATACTTCTTCTGATCTCACTATTTTAGAGGATCATTTTGTAGCTGACGATGCCTACAATTTCTTGGTGAATTGGCTACAAAGATTTCCACAGTTTAAATCCAGGGACTTTTTCATAGCAGGAGAAAGCTATGCTGGCCACTATATCCCTCAGCTTGCAGAGTTAATCTTTGACAGAAACAAAGATAGAAGCAAATACACCTTTATTAATCTTAAAGGTTTTATTGTAGGGAATCCAGAAACTGAAGATTACTATGACAACAAAGGTCTTCTAGAATATGCATGGAGTCATGCAGTTATATCAGATCAGCAATATGAGAAAGCAAAACAAGTTTGTGATTTCAAACAATCTCAATGGTCTAATGAGTGCAATCAGGTCATGAATGAAGTTTTCCATGATTACTCAGAAATTGATATATACAACATTTATGCACCAGCATGTCATTCAAATAGTACATCCTCAGTGACAGTAACAAATAATGTCCCTGAATCATTTTCCAAGGTGAACAATAATTATAGAATGAAGAGGATGAGAATTTTTGGGGGCTATGATCCTTGCTATTCAACATATGCAGAAGAATTTTTCAATAGGGTAGATGTTCAATCATCTTTTCATGCAAATACTATAAGAGAAAACAATAGCATAGCATGGAAGGTTTGCAATGATTCCATATTGAGGACTTACAACTTCTCTGTTTTTTCTGTACTCCCTATCTACACCAAACTCATCAAGGGTGGCCTTAAGATATGGATTTACAGTGGAGATGCAGATGGCAGACTACCTGTGATAGGGACACGATATTGTGTTGAAGCTTTAGGACTGCCTCTAAAGTCTACTTGGAGATCTTGGTACCATAATAATCAGGTTGGAGGAAGGATAGTGGAGTATGAAGGATTGACATATGTGACGGTGAGAGGAGCTGGTCACTTAGTGCCTCTCAACAAACCATCTGAGGCTCTCTCTCTTATTCACTCTTTCTTAACTGGAGACCATCTCCCTACTACACATCCATGA 1446 0.3769 MNVFLFVVQFLCFFLLTTTTSLFIKASEINVESYETDRIIDLPGQPSNPSVSHFSGYINVNEDHGRALFYWFFEAQSQPSNKPLLLWLNGGPGCSSIGYGAVVEIGPLLVNQNGEGLKFNPYSWNQEANLLFVESPVGVGFSYTNTSSDLTILEDHFVADDAYNFLVNWLQRFPQFKSRDFFIAGESYAGHYIPQLAELIFDRNKDRSKYTFINLKGFIVGNPETEDYYDNKGLLEYAWSHAVISDQQYEKAKQVCDFKQSQWSNECNQVMNEVFHDYSEIDIYNIYAPACHSNSTSSVTVTNNVPESFSKVNNNYRMKRMRIFGGYDPCYSTYAEEFFNRVDVQSSFHANTIRENNSIAWKVCNDSILRTYNFSVFSVLPIYTKLIKGGLKIWIYSGDADGRLPVIGTRYCVEALGLPLKSTWRSWYHNNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPSEALSLIHSFLTGDHLPTTHP 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00647 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185|GO:0006508
Mepo1g00647 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Mepo1g00647 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185|GO:0006508
Mepo1g00647 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 443 456 IPR001563 GO:0004185|GO:0006508
Mepo1g00647 481 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 460 IPR001563 GO:0004185|GO:0006508
Mepo1g00647 481 Gene3D alpha/beta hydrolase 33 293 IPR029058 -
Mepo1g00647 481 Gene3D - 379 473 - -
Mepo1g00647 481 FunFam Carboxypeptidase 379 473 - -
Mepo1g00647 481 FunFam Carboxypeptidase 33 293 - -
Mepo1g00647 481 ProSitePatterns Serine carboxypeptidases, histidine active site. 443 460 IPR033124 GO:0004185
Mepo1g00647 481 SUPERFAMILY alpha/beta-Hydrolases 39 474 IPR029058 -
Mepo1g00647 481 Pfam Serine carboxypeptidase 43 472 IPR001563 GO:0004185|GO:0006508
Mepo1g00647 481 ProSitePatterns Serine carboxypeptidases, serine active site. 183 190 IPR018202 GO:0004185
Mepo1g00647 481 Gene3D - 330 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00647 Mepo-Chr1 6203662 6208070 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00647 350 476 Calmodulin-binding Proteins AT2G22960 31.250 1.34e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00647 K16297 - gmx:100815141 827.009