Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00645 ATGAGAATCCCAAGTGATTTCACCCACTCACTTATTAGCACTATAAAAGTCGTCAATACATTTACATTGGCTTTGGATCCAAATTATTTCATTTTAGTTAGAGAAATGAATGTTTTTATGTCTGTCCTCCAATTCCTATGTTTCTTTCTTTTAACTATTACTACTTCCTCATTGTTCATTAAAGCATCTGAAATAAATGTTGAAAGCTATGAATCTGATAGAATAATTTATCTACCAGGACAACCTTCAACACCTCCAATTTCACACTTTTCAGGTTACATCACTGTCAATGAAGAACATGGGAGGGCTCTTTTCTATTGGTTCTTTGAAGCTCAATCTCAATCCTCCAATAAACCTCTCCTTCTCTGGCTCAATGGAGGACCGGGATGCTCCTCAATTGGAGGTGGTGCTGTTGTTGAGATAGGACCTCTTTTAGTCAACAAAAATGGTGAAGGACTAAAATTCAACCCATACTCTTGGAATCAAGAAGCAAATCTGTTATTTTTGGAGTCACCCGTTGGAGTTGGTTTTTCTTACACCAATACCTCTTCTGATCTCACCATTTTAGAGGATCAATTTGTGGCCGAGGATTCTTACAATTTCTTGGTGAATTGGCTACAAAGATTTCCACAGTTTAAATCCAGGGACTTTTTCATAGCAGGAGAAAGCTATGCTGGCCACTATATCCCTCAGCTTGCAGAGTTAATCTTTGACAGAAACAAAGATAGAAGCAAATACACCATTATTAATCTTAAAGGTTTTATTGTAGGGAATCCAGAAACTGATGATTATTATGATTATAAAGGCATTCTAGAATATGCATGGAGTCACGCAGTAATATCAGATCAGCAATATGACAAAGCAAAACAAGTTTGTGATTTTAAGCAATTTCGATGGTCTAATGAGTGCTTTCAGGCCATGGACCAACTCTTCCATGATTATTCAGAAATTGACATATTCAACATTTATGCCCCTGCATGTCGTTTAAATAGTACATCCACAGAAACGAAAAATGGCCCTGAATCACTTACAAAGGGTGGCCTTAAGATATGGATTTACAGTGGAGATGCAGATGGTAGATTACCCGTGATAGGGACACGATATTGTGTTGAGGCTTTAGGATTACCTCTTAAGTCTTTTTGGAGGCTTTGGTACCATCATAATCAGGTTGGAGGAAGGATAGTGGAGTATGAAGGATTGACATATGTGACAGTGAGAGGAGCTGGTCACTTAGTGCCTCTCAACAAACCAACTGAGGCTCTCTCTCTTATTCATTCTTTCGTAACTGGAGACCATCTCCCTACTACACGTCCATGA 1317 0.3834 MRIPSDFTHSLISTIKVVNTFTLALDPNYFILVREMNVFMSVLQFLCFFLLTITTSSLFIKASEINVESYESDRIIYLPGQPSTPPISHFSGYITVNEEHGRALFYWFFEAQSQSSNKPLLLWLNGGPGCSSIGGGAVVEIGPLLVNKNGEGLKFNPYSWNQEANLLFLESPVGVGFSYTNTSSDLTILEDQFVAEDSYNFLVNWLQRFPQFKSRDFFIAGESYAGHYIPQLAELIFDRNKDRSKYTIINLKGFIVGNPETDDYYDYKGILEYAWSHAVISDQQYDKAKQVCDFKQFRWSNECFQAMDQLFHDYSEIDIFNIYAPACRLNSTSTETKNGPESLTKGGLKIWIYSGDADGRLPVIGTRYCVEALGLPLKSFWRLWYHHNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPTEALSLIHSFVTGDHLPTTRP 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00645 438 Pfam Serine carboxypeptidase 335 429 IPR001563 GO:0004185|GO:0006508
Mepo1g00645 438 Pfam Serine carboxypeptidase 79 331 IPR001563 GO:0004185|GO:0006508
Mepo1g00645 438 ProSitePatterns Serine carboxypeptidases, histidine active site. 400 417 IPR033124 GO:0004185
Mepo1g00645 438 Gene3D alpha/beta hydrolase 69 329 IPR029058 -
Mepo1g00645 438 Gene3D - 340 430 - -
Mepo1g00645 438 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 76 417 IPR001563 GO:0004185|GO:0006508
Mepo1g00645 438 ProSitePatterns Serine carboxypeptidases, serine active site. 219 226 IPR018202 GO:0004185
Mepo1g00645 438 FunFam Carboxypeptidase 69 329 - -
Mepo1g00645 438 SUPERFAMILY alpha/beta-Hydrolases 76 431 IPR029058 -
Mepo1g00645 438 PRINTS Carboxypeptidase C serine protease (S10) family signature 156 168 IPR001563 GO:0004185|GO:0006508
Mepo1g00645 438 PRINTS Carboxypeptidase C serine protease (S10) family signature 205 230 IPR001563 GO:0004185|GO:0006508
Mepo1g00645 438 PRINTS Carboxypeptidase C serine protease (S10) family signature 400 413 IPR001563 GO:0004185|GO:0006508
Mepo1g00645 438 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 179 IPR001563 GO:0004185|GO:0006508
Mepo1g00645 438 FunFam Carboxypeptidase 340 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00645 Mepo-Chr1 6190237 6199004 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00645 347 433 Calmodulin-binding Proteins AT2G22960 32.955 2.14e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00645 K16297 - gmx:100792930 523.472