Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00639 ATGGATGTAAAAGGAAGAGGAAGCAACAACAAAAACAACTTTATGAGTAGTGATCAAGAGGATGAGATGGACCTTAGAAGAGGTCCTTGGACCGTGGAGGAGGACTTAACCCTCATGAATTACATTGCTACTCATGGTGAAGGTCGTTGGAATACCCTCGCCAACTCCGCTGGTCTCAAACGAACCGGTAAGAGTTGCAGATTAAGGTGGCTTAATTATCTCCGCCCCGATGTTAGACGTGGAAACATCACACTTGAAGAACAACTTTTGATTCTCGAGCTCCATACTCGTTGGGGTAACCGATGGTCGAAAATAGCCCAATATTTACCCGGAAGAACAGACAATGAAATAAAAAATTATTGGAGAACTCGTGTTCAAAAGCTTGCCAAACAACTCAAATGCGACGTGAATAGCAAGCAATTTAAGGACACCATGCGCTACCTTTGGATGCCAAGGCTAGTCGAACGTATTCAAGCTGCTGCTTCTGCCGCCACTACCATCACCACAACCACCACGACCAATACATCATATAATAATAACGGCAGCAAAATGATGGGTACAACTCCAACAATTATAAACTATGAATTTATGAGTTCACAACCACATATGACACAAAGTTATACCCTAGAGAACAGCAACACAACTGCATCATCAGATTCATTTGAGAATAAGGTGTCAACATTTTCGGATTTGGGTGATAATAATTATTATTGTACAAGTGTTAGTAATAAGAATAACCCTAATACTAATTCAAATTATTACCAACCTTCTCATCAATTTAGCTTCTCGGATTGTATCACAAGCCCGTCTAGATTGTTTTCTCAAGGATTAATGGATTTCCAATCCATGGAGCCAAACACCACGTGGATGCAAAGTGGGGACTCATCTGACATTTTTTGGAATGCTGAGAACATGTTGTTTTTACAGCAACAACTTATGAACGACACAATGTAA 954 0.4036 MDVKGRGSNNKNNFMSSDQEDEMDLRRGPWTVEEDLTLMNYIATHGEGRWNTLANSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHTRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKLAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAASAATTITTTTTTNTSYNNNGSKMMGTTPTIINYEFMSSQPHMTQSYTLENSNTTASSDSFENKVSTFSDLGDNNYYCTSVSNKNNPNTNSNYYQPSHQFSFSDCITSPSRLFSQGLMDFQSMEPNTTWMQSGDSSDIFWNAENMLFLQQQLMNDTM 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00639 317 Gene3D - 84 147 - -
Mepo1g00639 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 74 IPR017930 -
Mepo1g00639 317 ProSiteProfiles Myb-like domain profile. 75 125 IPR001005 -
Mepo1g00639 317 ProSiteProfiles Myb-like domain profile. 22 74 IPR001005 -
Mepo1g00639 317 SMART sant 26 76 IPR001005 -
Mepo1g00639 317 SMART sant 79 127 IPR001005 -
Mepo1g00639 317 Gene3D - 27 79 - -
Mepo1g00639 317 FunFam MYB transcription factor 84 147 - -
Mepo1g00639 317 MobiDBLite consensus disorder prediction 1 26 - -
Mepo1g00639 317 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 21 223 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mepo1g00639 317 Pfam Myb-like DNA-binding domain 27 74 IPR001005 -
Mepo1g00639 317 Pfam Myb-like DNA-binding domain 80 123 IPR001005 -
Mepo1g00639 317 MobiDBLite consensus disorder prediction 1 16 - -
Mepo1g00639 317 CDD SANT 100 123 IPR001005 -
Mepo1g00639 317 FunFam Myb transcription factor 27 79 - -
Mepo1g00639 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 129 IPR017930 -
Mepo1g00639 317 SUPERFAMILY Homeodomain-like 24 121 IPR009057 -
Mepo1g00639 317 CDD SANT 29 74 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00639 Mepo-Chr1 6145377 6147344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00639 1 175 MYB Transcription Factor Family AT5G49620 72.632 4.80e-86 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo1g00639 Myb_DNA-binding 3.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00639 K09422 - gmx:100791349 412.92