Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00621 ATGGGTTGCTTTGGATTCTGCAAAGAGAATGATGCTTATACCACTGCTGACAAAGGAATCTTCACGCAAACCAATCCTAACGGCGGGAACACCAGTCATCATGGTAGACACACCGCAGTAACTGTTCCTCGGCCCATAAATCTTCAACCTATTTCTGTCCCTTCTATTACAGTAGATGAACTAAGGTCTTTGACAGATAATTTTGGTACAAAAACTTTCGTTGGTGAAGGTGCATATGGTAAAGTGTATCGTGCCACATTGAAAAATGGACGCGAAGTGGCAATTAAAAAGTTGGATCCCAGTAAGCAGCCAGACCAAGAATTTCTTTCTCAGGTCTCAATCGTATCAAGGCTAAAGCATGAAAACGTCGTTGAGCTTGTTAATTACTGTGTTGATGGTCCTTTGCGTGCCCTTGCATACGAGTATGCTCCTAATGGATCCCTTCATGATATTCTACATGGACGCAAAGGTGTCAAGGGTGCAGAACCTGGTCAAGTTCTGTCGTGGGCTGAAAGAGTTAAAATTGCTGTTGGAGCAGCCAGAGGCCTTGAATATCTTCATGAAAAGGCAGAGGTTCATATTGTCCATCGTTATATTAAATCTAGTAACATACTCCTATTCGAGGACGGCATTGCAAAGATTGCCGATTTTGATCTGTCAAACCAAGCCCCTGATGCTGCCGCACGTCTTCATTCTACCCGTGTTCTTGGAACCTTTGGTTATCATGCTCCAGAGTATGCAATGACCGGAAACCTCTCTTCAAAGAGTGATGTTTACAGTTTTGGAGTTATACTGTTAGAACTCTTAACCGGGCGTAAGCCTGTTGATCATACACTTCCCCGAGGACAACAAAGCCTCGTGACCTGGGCAACACCAAAGCTTAGTGAAGATAAGGTGAAGCAGTGTGTTGATGTTAGACTAAAGGGAGAGTACCCTTCTAAGTCAGTTGCAAAGTTGGCTGCTGTTGCTGCACTGTGTGTTCAATATGAAGCTGAGTTTCGACCAAATATGAGCATCATTGTCAAAGCTTTACAGCCTTTAATGAATAATACTCGTTCTTCTCAACCAAGGGAACCACGCAACTTGGATCAGATTGATTAA 1101 0.4332 MGCFGFCKENDAYTTADKGIFTQTNPNGGNTSHHGRHTAVTVPRPINLQPISVPSITVDELRSLTDNFGTKTFVGEGAYGKVYRATLKNGREVAIKKLDPSKQPDQEFLSQVSIVSRLKHENVVELVNYCVDGPLRALAYEYAPNGSLHDILHGRKGVKGAEPGQVLSWAERVKIAVGAARGLEYLHEKAEVHIVHRYIKSSNILLFEDGIAKIADFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGNLSSKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDVRLKGEYPSKSVAKLAAVAALCVQYEAEFRPNMSIIVKALQPLMNNTRSSQPREPRNLDQID 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00621 366 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 10 351 - -
Mepo1g00621 366 SUPERFAMILY Protein kinase-like (PK-like) 48 344 IPR011009 -
Mepo1g00621 366 FunFam pto-interacting protein 1 144 355 - -
Mepo1g00621 366 ProSiteProfiles Protein kinase domain profile. 68 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00621 366 Gene3D Phosphorylase Kinase; domain 1 32 142 - -
Mepo1g00621 366 Pfam Protein tyrosine and serine/threonine kinase 73 344 IPR001245 GO:0004672|GO:0006468
Mepo1g00621 366 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
Mepo1g00621 366 Gene3D Transferase(Phosphotransferase) domain 1 143 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00621 Mepo-Chr1 5895286 5898449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00621 49 356 Receptor kinase-like Gene Family AT4G02010 46.584 5.85e-88 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Mepo1g00621 PK_Tyr_Ser-Thr 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00621 K13436 - gmx:547595 616.305