Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00620 ATGGCGTCTGATCTAAGCTCGAGGTTATCAAAGAAAACATCTATTTTTGGGTTGGAAGTATGGGAATTAATGGGGCTAATAGTTGGATTGTTCATTGTAATCATTCTTCTGGTGGTATCAATATGTCTTACTTCAAAAAAGAAATCTAGAAGAGTCAATGGCATGCTTCCCCTGAGCCATAGGTTATCCGTTTCAGAAGAGATCAAAGAGATTAAAATGGATCAGGTTTCAACGAATAGTCATCCTCAAAACGGTGCTTTTATGAGTCTTTATGACAAGTTCAGTGACAAAGAATCTGAAAAGATTTTGCTCCAAACAAAGAATGGGGAATATAGCAGTCAATCAGGCTCATTTGTTCACGTCGAGAAAGATGCTGCTGGCTCTCAATCGGGTGAAGAAAGTGGTGCTAAGTCCGTTTCTGCACACAGGCCTTCTTTAACTTCACCATCGCCTTTGTCTGGTCTTCCCGAGTTTTCTCACCTTGGATGGGGACACTGGTTTACATTGAGGGACCTAGAACTTGCAACAAACAAGTTTTCAAAAGACAATATTATTGGTGAAGGAGGATATGGAGTTGTTTATCAAGGCCAGCTTATCAACGGGAATCCAGTGGCTATCAAAAAGCTACTTAATAATCTTGGACAAGCTGAAAAAGAATTTAGAGTAGAAGTTGAGGCTATTGGTCATGTGAGGCACAAGAATTTGGTTAGACTTTTGGGTTTTTGCATTGAAGGCACTCACAGGTTGTTGATTTATGAGTATGTTAATAATGGAAACTTGGAGCAATGGCTTCATGGTGCCATGCGGCAATATGGTTATCTTACATGGGATGCCCGGATTAAAATTCTTCTTGGAACAGCCAAAGCGCTGGCTTACTTGCACGAGGCAATTGAGCCGAAAGTTGTCCATCGAGATATCAAGTCAAGTAATATTCTTATTGATGATGACTTCAATGCCAAAATATCTGACTTTGGACTAGCCAAGTTACTTGGTGCCGGAAAAAGTCACATTACAACTCGAGTAATGGGAACTTTTGGATATGTTGCTCCAGAATATGCCAATTCTGGCTTACTAAACGAGAAGAGTGATGTGTATAGCTTTGGCGTATTGCTCCTTGAAGCAATTACAGGAAGAGATCCAGTGGATTATAGCCGCTCAGCAGCTGAGGTAAATTTGGTTGATTGGCTGAAGATGATGGTAGGTAATAGGCACGCGGAAGAGGTGGTGGATCCAAACATTGAGACGAGACCATCAACAAGTGCCCTTAAACGAGCCCTTTTGACTGCTTTGAGATGTGTTGATCCAGATTCTGAAAAAAGACCAAAAATGAGTCAAGTGGTTCGCATGCTTGAATCAGAAGAATATCCCATACCTAGAGAGGATCGAAGACGCAGGAAGAGTAATGCCAGAAGTGCTGACGTGGAGACGCAAAAGGAGACTTCTGATACAGATAAGAGTGATCATCCAGATTCCAAGTCTAACGGAAGAAGAAATCAAAGGAAGTAA 1506 0.413 MASDLSSRLSKKTSIFGLEVWELMGLIVGLFIVIILLVVSICLTSKKKSRRVNGMLPLSHRLSVSEEIKEIKMDQVSTNSHPQNGAFMSLYDKFSDKESEKILLQTKNGEYSSQSGSFVHVEKDAAGSQSGEESGAKSVSAHRPSLTSPSPLSGLPEFSHLGWGHWFTLRDLELATNKFSKDNIIGEGGYGVVYQGQLINGNPVAIKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGFCIEGTHRLLIYEYVNNGNLEQWLHGAMRQYGYLTWDARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRSAAEVNLVDWLKMMVGNRHAEEVVDPNIETRPSTSALKRALLTALRCVDPDSEKRPKMSQVVRMLESEEYPIPREDRRRRKSNARSADVETQKETSDTDKSDHPDSKSNGRRNQRK 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00620 501 MobiDBLite consensus disorder prediction 437 501 - -
Mepo1g00620 501 FunFam Putative receptor-like serine/threonine-protein kinase 255 466 - -
Mepo1g00620 501 MobiDBLite consensus disorder prediction 131 151 - -
Mepo1g00620 501 SMART serkin_6 179 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00620 501 Pfam Protein kinase domain 180 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00620 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 301 313 IPR008271 GO:0004672|GO:0006468
Mepo1g00620 501 PANTHER OS01G0323000 PROTEIN 5 481 - -
Mepo1g00620 501 ProSitePatterns Protein kinases ATP-binding region signature. 185 208 IPR017441 GO:0005524
Mepo1g00620 501 FunFam Putative receptor-like protein kinase 161 254 - -
Mepo1g00620 501 CDD STKc_IRAK 185 451 - -
Mepo1g00620 501 Gene3D Transferase(Phosphotransferase) domain 1 255 468 - -
Mepo1g00620 501 SUPERFAMILY Protein kinase-like (PK-like) 163 460 IPR011009 -
Mepo1g00620 501 MobiDBLite consensus disorder prediction 122 151 - -
Mepo1g00620 501 ProSiteProfiles Protein kinase domain profile. 179 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00620 501 Gene3D Phosphorylase Kinase; domain 1 160 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00620 Mepo-Chr1 5890309 5894235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00620 17 453 Trihelix Transcription Factor Family AT1G70460 40.940 2.82e-94 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Mepo1g00620 Pkinase 3.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00620 - - gmx:100793499 856.284