Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00609 ATGTTTTGGGATAGTAATTTCCTGGAAATTGATGATATATGTAGAAAGAGTTTTTTACAATTTAGAGTCATTGGTCTAAGGGTTTGTAAGCAAAGCAAGTCTTCTTCTAAAGAAATGGATGAAAATGTTGCAAGTATTCAGCCAGTAGTAGATTCTGGCAGCAAGCAAGATTCAGATAAGAAAAAGACTAATGATGAAACCACCAATACAGTACCTTTATACAAGCTTTTCTCATTTGCCGATCCTTTGGATCGTTTATTGATGTTTGTTGGGACTGTTGGTGCTATTGGGAATGGAATCTCCATGCCCTTGATGACTTTAATATTTGGAAGTATGATCAATGCATTTGGAGGATCATCAAGCACAGAAGAGGTTGTTGATGAAGTTTCCAAGGTGTCCTTGAAATTCGTATACTTAGCCGCGGGTACCTTCGTTGCGTCTCTTTTGCAGTTGACTTGCTGGATGATCACTGGTGAGAGACAGGCTGCAAGAATCAGAAGCTTATACCTCCAAACTATTTTGAGGCAAGATGTGAGTTTCTTTGATAAGGAAACTAATACTGGAGAGGTTGTTGGAAGAATGTCTGGTGATACCGTTCTTATTCAAGATGCCATGGGTGAGAAGGTGGGACAGTTTATACAGTTAATGGCTACTTTCTTTGGAGGTTTTGTGATAGCATTCATCAAGGGATGGCTTTTAACTGTTGTCATGATGTCTTGTATTCCACTTCTTGTCTTGTCGGGTGCAATGATGAGTATGGTTATTTCAAAAGCATCATCCAGTGGACAAGCAGCTTATTCTAAAGCAGCAACTGTTGTAGAACAGACAATAGGCTCTATTAGAACTGTTGCGTCATTCACCGGAGAGAAACAGGCCATAGCTAAATATGATCAGTCCTTAATTGATGCTTATAAAACTGTAGTAAAAGAGGCACTAGCTTCTGGTTTAGGGTTTGGTTCACTCTACTTTGTTGTTATTGCTAGTTATGGTTTGGCAGTATGGTTTGGTGGAAAAATGGTAATAGAGAAAGGATATACAGGAGGGGAAGTTGTGACTATCATTTTTGCTGTATTGACTGGCTCCATGTCTCTAGGACAGGCATCTCCAAGCTTGAGTGCTTTTGCTGCAGGACAAGCTGCGGCATTTAAAATGTTCGAAACGATTAAAAGGAGGCCCGAAATTGATGCTTACGACACAACCGGGCGAAAGCTTGATGACATTCGTGGAGACATAGAGCTCAGGGAGGTTTGCTTTAGTTATCCTACAAGACCAGATGAACTGATATTCAATGGATTTTCTCTAACAATACCAAGTGGGACTACTGTAGCTTTGGTAGGGCAAAGTGGGAGTGGAAAATCCACAGTTGTCAGTTTGATAGAGAGATTTTATGATCCACAGGCTGGTGAAGTTCTCATTGACGGTGTAAACCTCAAAGAATTTCAACTGAAATGGATCAGACAGAAAATAGGCCTAGTCAGCCAGGAACCTGTTCTCTTCACTTGCAGCATTAAAGAGAACATTGCATATGGAAAGGATGGTGCTACCGATGAAGAAATCAGAGCTGCAGCCGAACTCGCTAATGCTGCAAAATTTATCGATAAACTTCCTCAGGGACTAGACACAATGGTTGGTGAGCATGGAACTCAGCTCTCTGGGGGACAAAAGCAGAGAGTTGCAATAGCAAGAGCGATTCTGAAAGATCCACGAATATTACTTCTCGATGAAGCTACAAGTGCGCTTGATGCTGAATCTGAGAGAATTGTACAAGAGGCATTGGATAGAATAATGGTAAACCGAACAACTGTGATTGTAGCTCACCGTTTAAGTACCATAAAGAATGCTGATACCATTGCCGTTATTCATCAAGGAAAAATAATTGAAAGAGGTTCACATGCTCAGCTCACAAGGGATCCAGATGGAGCCTATAGCCAGCTTATTAGGCTGCAAGAAATGAAGGGGTCAGAACAGAATGTTACCAATGACAAAAACAAGTCAAACAGTATAGTGCTATCTGAAAGACGATCGAGTCAAAGATCTCTCTCCTCAAGGTCTTTAAGCCAAGTGTCATCTGGAGGTGGGAACAGCGGTCGTCACTCATTCTCAGCATCACATGTTGTGCCAACTGTACCAGTTGGCTTCTCAGAAATTGCGGATGGTGGACCACAAGTTCCTCCTTCTACGGTTTCTTCACCACCAGAAGTTCCACTTTATCGCCTGGCCTATTTAAACAAGCCCGAGATTCCTGTCTTACTTATAGGAACTATAGCTGCAGTGTTGCATGGTGTAATATTACCAATTTTTGGCCTCTTGCTTTCGAAAATGATTAGTATTTTCTACGAGCCAGCTGACGAACTTCGTCACGATTCAAAAGTTTGGGCGCTAGTATTTGTTGGGCTCGCTGTGGCATCGTTATTCATTTTTCCATGTAGATTCTACTTTTTTGGCATTGCTGGAGGTAAGTTGATCAAAAGGATCCGGAAAATGTGTTTTGAGAAGGTAGTTCATATGGAAGTGAGTTGGTTTGATGAAGCTGAGCATTCAAGTGGCGCAATTGGAGCAAGGCTCTCTACCGATGCAGCTTCAGTTCGAGCTTTGGTTGGTGATGCACTCGGTTTACTGGTTGAAAATATTGCAACAGCTATAGCTGGATTGGTAATTGCTTTTACAGCTAGCTGGCAGCTTGCTCTTATAATCCTTGCTTTGGTGCCTCTACTTGGACTTAATGGATTTTTGCAAGTGAAGTTCTTGAAAGGGTTCAGCAATGATTCAAAGAAGTTGTATGAGGAAGCAAGTCAAGTGGCGAATGATGCAGTAGGGAGTATAAGAACAGTTGCTTCTTTCTGTTCTGAAGAGAAGGTGATGGAATTATATAAGCAAAAATGTGAGGGACCAATTAAGACAGGCATAAGGAGAGGGATAATAAGTGGATTTGGTTTTGGGATATCATTCTTCGTGTTGTATGCAGTTTATGCATTAAGTTTTTATGCTGGAGCGCGTCTTGTTGAGGATGGAAAATCTTCATTCTCAGATGTTTTCCGTGTCTTTTTCGCTTTAAGCATGGCAGCGATAGGACTATCTCAATCCGGGTCATTGTTACCTGATTCAACTAAGGCGAAAAGTGCAGCTGCTTCCATATTTGCTATTCTTGATAGGAAATCGCTCATAGATCCAACTGATGAATCAGGAATTACATTGGAAGAAGTCAAGGGAGAAATTGAGTTTAAGCATGTCAGTTTCAAGTATTCTACTAGACCTGATATTCAAATATTCAGAGATCTTTGCTTGAACATTCAAAGTGGCAAGACAGTTGCACTTGTTGGAGAAAGTGGAAGTGGAAAATCAACAGTGATCTCATTGATACAAAGATTTTATGATCCAGATTCAGGCCACATTACACTTGATGGAAAAGAAATCCAAAGTCTTCAAGTGAAATGGCTAAGACAACAAATGGGACTGGTAAGCCAAGAGCCTGTGCTGTTTAATGACACCATCAGAGCCAATATTGCATATGGTAAAGGAGGAGATGCATCAGAGGCAGAGATTATAGCCGCAGCAGAATTAGCAAATGCTCACAAGTTTATTAGTAGTTTGCAAAAGGGTTATGACACAATAGTAGGAGAGAGAGGAGTTCAATTATCTGGGGGACAAAAGCAGCGTGTGGCAATTGCGAGAGCTATAGTGAAGAATCCAAAAATACTATTACTAGATGAAGCAACCAGTGCACTTGATGCTGAGTCCGAGAAGGTGGTACAAGATGCACTTGACCGTGTAATGGTGGAGCGTACGACAATAATAGTGGCGCATAGGTTATCGACTATTAAAGGTGCAGATTTAATAGCAGTAGTTAAGAATGGTGTGATAGCAGAGAAAGGAAAACATGAAGCATTGCTCCATAAAGGTGGTGACTATGCTTCTTTAGTAGCATTACATACAAGTGCTTCTACATCTTAG 3951 0.4105 MFWDSNFLEIDDICRKSFLQFRVIGLRVCKQSKSSSKEMDENVASIQPVVDSGSKQDSDKKKTNDETTNTVPLYKLFSFADPLDRLLMFVGTVGAIGNGISMPLMTLIFGSMINAFGGSSSTEEVVDEVSKVSLKFVYLAAGTFVASLLQLTCWMITGERQAARIRSLYLQTILRQDVSFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGQFIQLMATFFGGFVIAFIKGWLLTVVMMSCIPLLVLSGAMMSMVISKASSSGQAAYSKAATVVEQTIGSIRTVASFTGEKQAIAKYDQSLIDAYKTVVKEALASGLGFGSLYFVVIASYGLAVWFGGKMVIEKGYTGGEVVTIIFAVLTGSMSLGQASPSLSAFAAGQAAAFKMFETIKRRPEIDAYDTTGRKLDDIRGDIELREVCFSYPTRPDELIFNGFSLTIPSGTTVALVGQSGSGKSTVVSLIERFYDPQAGEVLIDGVNLKEFQLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDGATDEEIRAAAELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVIVAHRLSTIKNADTIAVIHQGKIIERGSHAQLTRDPDGAYSQLIRLQEMKGSEQNVTNDKNKSNSIVLSERRSSQRSLSSRSLSQVSSGGGNSGRHSFSASHVVPTVPVGFSEIADGGPQVPPSTVSSPPEVPLYRLAYLNKPEIPVLLIGTIAAVLHGVILPIFGLLLSKMISIFYEPADELRHDSKVWALVFVGLAVASLFIFPCRFYFFGIAGGKLIKRIRKMCFEKVVHMEVSWFDEAEHSSGAIGARLSTDAASVRALVGDALGLLVENIATAIAGLVIAFTASWQLALIILALVPLLGLNGFLQVKFLKGFSNDSKKLYEEASQVANDAVGSIRTVASFCSEEKVMELYKQKCEGPIKTGIRRGIISGFGFGISFFVLYAVYALSFYAGARLVEDGKSSFSDVFRVFFALSMAAIGLSQSGSLLPDSTKAKSAAASIFAILDRKSLIDPTDESGITLEEVKGEIEFKHVSFKYSTRPDIQIFRDLCLNIQSGKTVALVGESGSGKSTVISLIQRFYDPDSGHITLDGKEIQSLQVKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDASEAEIIAAAELANAHKFISSLQKGYDTIVGERGVQLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVVQDALDRVMVERTTIIVAHRLSTIKGADLIAVVKNGVIAEKGKHEALLHKGGDYASLVALHTSASTS 1316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00609 1316 Pfam ABC transporter transmembrane region 88 362 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g00609 1316 Pfam ABC transporter transmembrane region 750 1020 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g00609 1316 SUPERFAMILY ABC transporter transmembrane region 738 1056 IPR036640 GO:0005524|GO:0016020
Mepo1g00609 1316 Gene3D ABC transporter type 1, transmembrane domain 1040 1313 IPR036640 GO:0005524|GO:0016020
Mepo1g00609 1316 FunFam ABC transporter B family member 9 1039 1061 - -
Mepo1g00609 1316 SUPERFAMILY ABC transporter transmembrane region 75 395 IPR036640 GO:0005524|GO:0016020
Mepo1g00609 1316 ProSitePatterns ABC transporters family signature. 1212 1226 IPR017871 GO:0005524|GO:0016887
Mepo1g00609 1316 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 89 376 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g00609 1316 CDD ABC_6TM_Pgp_ABCB1_D1_like 88 372 - -
Mepo1g00609 1316 Gene3D - 1062 1311 IPR027417 -
Mepo1g00609 1316 Gene3D - 401 650 IPR027417 -
Mepo1g00609 1316 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 411 647 IPR003439 GO:0005524
Mepo1g00609 1316 Gene3D ABC transporter type 1, transmembrane domain 75 665 IPR036640 GO:0005524|GO:0016020
Mepo1g00609 1316 CDD ABC_MTABC3_MDL1_MDL2 1072 1307 - -
Mepo1g00609 1316 FunFam ABC transporter B family member 1 1062 1311 - -
Mepo1g00609 1316 SMART AAA_5 438 610 IPR003593 GO:0016887
Mepo1g00609 1316 SMART AAA_5 1099 1292 IPR003593 GO:0016887
Mepo1g00609 1316 Pfam ABC transporter 1092 1240 IPR003439 GO:0005524
Mepo1g00609 1316 CDD ABC_6TM_Pgp_ABCB1_D2_like 740 1055 - -
Mepo1g00609 1316 Pfam ABC transporter 430 578 IPR003439 GO:0005524
Mepo1g00609 1316 MobiDBLite consensus disorder prediction 652 701 - -
Mepo1g00609 1316 ProSitePatterns ABC transporters family signature. 550 564 IPR017871 GO:0005524|GO:0016887
Mepo1g00609 1316 FunFam ABC transporter B family member 1 401 650 - -
Mepo1g00609 1316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1061 1309 IPR027417 -
Mepo1g00609 1316 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 751 1037 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g00609 1316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 403 649 IPR027417 -
Mepo1g00609 1316 Gene3D ABC transporter type 1, transmembrane domain 732 1039 IPR036640 GO:0005524|GO:0016020
Mepo1g00609 1316 CDD ABC_MTABC3_MDL1_MDL2 411 649 - -
Mepo1g00609 1316 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1072 1309 IPR003439 GO:0005524
Mepo1g00609 1316 PANTHER ABC TRANSPORTER B FAMILY 52 652 IPR039421 -
Mepo1g00609 1316 FunFam ABC transporter B family member 9 75 407 - -
Mepo1g00609 1316 FunFam ABC transporter B family member 1 730 1038 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00609 Mepo-Chr1 5760905 5768010 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00609 71 1310 Calmodulin-binding Proteins AT2G36910 45.404 0.0 1081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00609 K05658 - gmx:100800293 2015.74