Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00608 ATGTTGGCCAGGGCTAGCTTGGATGAGGATATTGCTTCAACAGAGATGACAGGGTCAACAATTCATCATCCACCAGTTCCTGCAGGTGCTGAAAATGTTCAAGAAATGGCTGACATGCACCAGGATTCCAAGAATAACAAGGTGAAGGATCAAAGCAATAAGACAGTACCCTTTTACAAGCTTTTCACATTTGCAGACTCATGGGATTATTTGTTGATGTTCGTTGGGACTGTAAGTGGTGTTGCGAATGGAATCTCTATGCCTTTAATGACTATAATTATTGGAGATGCTATTAATGCTTTTGGAGGAAATGTTAGCACTAAACAAGTAGTTCATCAAGTTTCCAAGGTGTCTGTCAAGTTTGCAATCATGGGTGCATGTGCCTTTTTTGCAGCATTTCTACAGGTGTTTTGTTGGATGATCACAGGGGAGAGACAAGCTGCAAGAATAAGGGCATTATACCTCAAAGCGATTTTAAGGCAAGATATCAGTTTCTTTGACAAGGAAACAAACAGTGGTGAGTTTGTTGGAAGAATGTCAGGTGATACAGTTCTTATTCAAGAAGCCATGGGAGACAAGGTAGGAAAATTCATACAATACGTCTCATGTTTTTTAGGAGGTTTAGTTGTGGCATTCATCTTGGGTTGGCTTCTAACCCTTGTCCTTCTATCGTCTATTCCTCTTCTTGTCCTCTCTGGTTCCATAATGAGCTTTGCTTTCGCAATGATGGCATCCCGTGGACAAACAGCATATTCTGAAGCAGCAACTATAGTAGAGCAGATAATCGGTTCAATTCGAACAGTTGCATCATTTACCGGCGAGAAACAAGCTATATCTCAATACAATCAATCCTTAACTAAAGCTTACAAAGTTGGAGTACAAGAGGGATTGGCTATTGGTTTAGGCCTCGGTTCGGTTCGTTTATTTGTTTACTGCAGTTATGCTTTGGCGGTATGGTTTGGAGGGAAGATGGTACTTGAGAAAGGTTATACAGGAGGTGAAGTCATAAGTGTATTTTTTGCAGTACTAACCGGTTCCTTGTCTCTAGGACAAGCAACTTCAAGCTTAACAGCATTTGCTGCTGGACAAGCTGCAGCTTTTAAGATGTTTAAAACAATCAAAAGAAAGCCGGAAATTGATGCTTATGACACAACCGGGCGAAAGCTTGATGACATTCAGGGAGACATAGAGCTTAGGGAGGTTTGCTTTAGTTATCCTACAAGACCAAATGAACTGATATTCAATGCATTTTCTCTTTCGATATCAAGTGGTACTACCGTGGCTTTGGTCGGGCAAAGTGGGAGTGGAAAATCAACAGTGATAAATTTGATAGAGAGATTTTATGATCCACAGGATGGTCAAATTCTCATTGACGGTATTGACCTCAGAGAATTTCAATTGAAATGGATCAGACAGAAAATAGGCCTAGTGAGTCAGGAACCAGTTCTCTTTACTTGTAGCATTAAAGAGAACATTGCCTATGGTAAGGATGCGGCAACCGATGAAGAAATCCTAGCTGCAGCAGAACTTGCTAATGCTGCTAACTTCATCGATAAATTTCCTCTTGGACTTGAAACGATGGTCGGTGAGCATGGAGCACAACTCTCTGGAGGCCAAAAGCAAAGAATTGCTATAGCAAGAGCAATTCTGAAAGATCCAAGAATTCTACTCCTTGATGAAGCAACAAGTGCCCTTGATGCAGAATCTGAAAGAGTAGTACAAGAGACCCTGGACAGAATTATGATAAACCGAACAACCATCATCGTAGCTCACCGCCTAAGCACAATAAGGAACGCTGATATCATTGCTGTTATTCACGAAGGAAAAGTAGTAGAAAAAGGTACACATGCTGAGCTCACTAAAAATCCTGATGGAGCTTATAGTCAACTCATTAGATTGCAAGAAATTAAAAAGGATTCATCAGAACAGTTTGGTGCTAATGTCTCGGATAATCTAGAAAACTTTGTAGACTCTGGAAGACAGTCAAGCCAAAGGTCTTTAAGCCGCGGATCATCAGGGATTGGAAACAGTAGTCACAACTTATTCATAGCATCAAATTCTATGCCAGCCACACTAGTAGGAGGGTCTGAAGTTGTTCCTTCAGCAAAAGCAACATCAACTAAAACTCGAGATGTCCCATTTCTTCTCCTTGCTTATCTTAACAAGCCTGAAATCCCGGTGTTACTCATGGGGGCTCTGGCAGCAACAGTAAATGGTGCAATGTTACCTATTCTGGGCCTTCTAATCTCCAAAATGATAAATACATTTTTTGAGCCTGCAGATGAACTTCGTAAAGACTCAAAATTTTGGGCATTAATATTTGTTTCCCTTAGTGTGGCATCGTTCATTTTTCATCCGTTAAGGTCATACTTTTTTGCTGTAGCTGGTTCTAATTTGATAAAAAGAATCCGGTTAATGTGCTTCGAGAAAATAATTCACATGGAAGTAGGATGGTTTGATAAAGCTGAGAATTCAAGTGGTGCACTTGGTGCAAGGCTGTCAACTGATGCTGCTTCGATTCGAACTTTGGTTGGTGATGCACTCGGTTTGCTTGTTCAAGATATCTCTACAGTTATTACAGCCTTGGTAATCTCCTTTCAGGCAAATTGGCAGCTTTCTCTCATCATTCTTGTTTTGTTGCCTCTACTATTAGTAAATGGATATTTTCAAATCACGGCCATGCAAGGATTCAGCACAGACGCAAAGAAACTATACGAGGAAGCAAGTCAAGTAGCAAACGACGCAGTAGGGAATATCAGAACAGTTTCTGCTTTCTGTGCCGAAGAGAAGGTGATGGAATTATACCAAAAGAAATGTGTAGTACCATTCCAGACAGGAAAAAGGCAGGGTTTAGTCAGTGGAACTGGTTTTGGGTTAGCAATCTTCTTTCTGTTTTGTGTCTATGCAATCAGTTTTTATGCCGGTGCCCAACTTATTGAGAATGGCAAAACTTCGATGTCAGGAGTTTTTCAAGTATTTTTCTCTCTCACAACGGCAGCTGTCGCATTATCTCAATCCGGCTTCATGGCTCCAGGAGCTAGTAAAGCCAAAAGTTCAGCTGCTTCAATATTTGCTATTCTTGATCAGAAATCAAAAATAGATACCAGTGATGAATCAGGAATGATACTGGAAGATGTGAAGGGAGAGATTGAGTTCCATCATGTCACTTTCAAGTATCCAACCAGACCTGATGTTCATATATTCAAAAATCTTTCCTTGACCATTCACTCAGGACAGACAGTTGCTCTAGTAGGTGAAAGTGGAAGTGGAAAATCAACAGTGATCTCATTGTTGCAAAGATTTTATGATCCAGATTCAGGTCAGATTAAACTGGATGGAACAGAAATCCAAAAGCTACATCTTAAATGGTTTAGGCAGCAAATGGGACTGGTAAGCCAAGAGCCTGTGTTGTTTAATGACACCATCAGAGCTAACATTGCCTATGGAAAAGGTGGTAATGCAACTGAGGCTGAAGTTATAGCCGCAGCAGAACTAGCAAATGCTCATAACTTCATTAGTAGTTTGCAGCAGGGGTATGATACAATAGTAGGAGTGCGAGGGATTCAACTTTCTGGAGGACAGAAGCAACGTGTGGCAATTGCAAGAGCCATAGTTAACAGTCCAAGAATATTACTACTAGATGAGGCCACAAGTGCACTTGATGCAGAGTCTGAAAAAGTGGTTCAAGATGCACTTGATAGAGTGAGGGTGGACAGAACCACCATTGTGGTGGCTCATAGATTATCTACAATAAAGGGTGCAAATTCAATTGCAGTTGTTAAAAATGGTGTGATTGAAGAGAAAGGAAAACATGACATATTGATCAACAAGGGTGGCACCTATGCTTCTTTAGTAGCATTGCACACAACTAGCACTGCTTCATCTTAA 3888 0.4074 MLARASLDEDIASTEMTGSTIHHPPVPAGAENVQEMADMHQDSKNNKVKDQSNKTVPFYKLFTFADSWDYLLMFVGTVSGVANGISMPLMTIIIGDAINAFGGNVSTKQVVHQVSKVSVKFAIMGACAFFAAFLQVFCWMITGERQAARIRALYLKAILRQDISFFDKETNSGEFVGRMSGDTVLIQEAMGDKVGKFIQYVSCFLGGLVVAFILGWLLTLVLLSSIPLLVLSGSIMSFAFAMMASRGQTAYSEAATIVEQIIGSIRTVASFTGEKQAISQYNQSLTKAYKVGVQEGLAIGLGLGSVRLFVYCSYALAVWFGGKMVLEKGYTGGEVISVFFAVLTGSLSLGQATSSLTAFAAGQAAAFKMFKTIKRKPEIDAYDTTGRKLDDIQGDIELREVCFSYPTRPNELIFNAFSLSISSGTTVALVGQSGSGKSTVINLIERFYDPQDGQILIDGIDLREFQLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDAATDEEILAAAELANAANFIDKFPLGLETMVGEHGAQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQETLDRIMINRTTIIVAHRLSTIRNADIIAVIHEGKVVEKGTHAELTKNPDGAYSQLIRLQEIKKDSSEQFGANVSDNLENFVDSGRQSSQRSLSRGSSGIGNSSHNLFIASNSMPATLVGGSEVVPSAKATSTKTRDVPFLLLAYLNKPEIPVLLMGALAATVNGAMLPILGLLISKMINTFFEPADELRKDSKFWALIFVSLSVASFIFHPLRSYFFAVAGSNLIKRIRLMCFEKIIHMEVGWFDKAENSSGALGARLSTDAASIRTLVGDALGLLVQDISTVITALVISFQANWQLSLIILVLLPLLLVNGYFQITAMQGFSTDAKKLYEEASQVANDAVGNIRTVSAFCAEEKVMELYQKKCVVPFQTGKRQGLVSGTGFGLAIFFLFCVYAISFYAGAQLIENGKTSMSGVFQVFFSLTTAAVALSQSGFMAPGASKAKSSAASIFAILDQKSKIDTSDESGMILEDVKGEIEFHHVTFKYPTRPDVHIFKNLSLTIHSGQTVALVGESGSGKSTVISLLQRFYDPDSGQIKLDGTEIQKLHLKWFRQQMGLVSQEPVLFNDTIRANIAYGKGGNATEAEVIAAAELANAHNFISSLQQGYDTIVGVRGIQLSGGQKQRVAIARAIVNSPRILLLDEATSALDAESEKVVQDALDRVRVDRTTIVVAHRLSTIKGANSIAVVKNGVIEEKGKHDILINKGGTYASLVALHTTSTASS 1295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00608 1295 Pfam ABC transporter 415 563 IPR003439 GO:0005524
Mepo1g00608 1295 Gene3D - 1048 1292 IPR027417 -
Mepo1g00608 1295 SMART AAA_5 423 595 IPR003593 GO:0016887
Mepo1g00608 1295 SMART AAA_5 1077 1271 IPR003593 GO:0016887
Mepo1g00608 1295 Gene3D ABC transporter type 1, transmembrane domain 60 642 IPR036640 GO:0005524|GO:0016020
Mepo1g00608 1295 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 388 634 IPR027417 -
Mepo1g00608 1295 CDD ABC_MTABC3_MDL1_MDL2 1050 1285 - -
Mepo1g00608 1295 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 396 632 IPR003439 GO:0005524
Mepo1g00608 1295 Gene3D - 386 635 IPR027417 -
Mepo1g00608 1295 Pfam ABC transporter transmembrane region 73 347 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g00608 1295 Pfam ABC transporter transmembrane region 728 1000 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g00608 1295 ProSitePatterns ABC transporters family signature. 535 549 IPR017871 GO:0005524|GO:0016887
Mepo1g00608 1295 ProSitePatterns ABC transporters family signature. 1190 1204 IPR017871 GO:0005524|GO:0016887
Mepo1g00608 1295 FunFam ABC transporter B family member 9 60 393 - -
Mepo1g00608 1295 CDD ABC_6TM_Pgp_ABCB1_D2_like 718 1033 - -
Mepo1g00608 1295 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1039 1287 IPR027417 -
Mepo1g00608 1295 SUPERFAMILY ABC transporter transmembrane region 60 380 IPR036640 GO:0005524|GO:0016020
Mepo1g00608 1295 CDD ABC_MTABC3_MDL1_MDL2 396 634 - -
Mepo1g00608 1295 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 74 361 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g00608 1295 FunFam ABC transporter B family member 1 386 635 - -
Mepo1g00608 1295 CDD ABC_6TM_Pgp_ABCB1_D1_like 73 357 - -
Mepo1g00608 1295 FunFam ABC transporter B family member 1 1040 1289 - -
Mepo1g00608 1295 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1050 1287 IPR003439 GO:0005524
Mepo1g00608 1295 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 729 1015 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g00608 1295 SUPERFAMILY ABC transporter transmembrane region 716 1030 IPR036640 GO:0005524|GO:0016020
Mepo1g00608 1295 FunFam Uncharacterized protein 1014 1040 - -
Mepo1g00608 1295 Gene3D ABC transporter type 1, transmembrane domain 697 900 IPR036640 GO:0005524|GO:0016020
Mepo1g00608 1295 Gene3D ABC transporter type 1, transmembrane domain 945 1047 IPR036640 GO:0005524|GO:0016020
Mepo1g00608 1295 PANTHER ABC TRANSPORTER B FAMILY 37 638 IPR039421 -
Mepo1g00608 1295 FunFam ABC transporter B family member 1 708 1013 - -
Mepo1g00608 1295 Pfam ABC transporter 1069 1218 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00608 Mepo-Chr1 5749979 5756187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00608 37 635 Calmodulin-binding Proteins AT2G36910 38.182 4.61e-119 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00608 K05658 - gmx:100777713 1912.12