Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00599 ATGGTAGGGAAAGTTGCACTGCAAAAACTAGTACAAGTTGATGAAAGGCTATATGATAAAAATACTGTAGGAATAGGATGTAGTGGTCTCAGTTTGAGTCTGAATACTAATTCAGAAGAGCTTCCAATGAATAATCAAGACCAGCCTATCCCTCAACTCAAATTGGGGTGGCTGGAAACTAAGGTAGAGGAGGTGAAGAGGGAGAATCAGATTTTAAGATCTATGTTAAATCAAGTAACTCAACACTATACACTTCTTCAGAATCAGTTCTTAGTGGAGACGATGCAGAAGCAGCATCAACAATCTTCGTCTAAAATCAATAAACAAATAATATTAGAGGAAGATCAAGCATCTCAACTTGCTTCTTGTAGAAAAGCTAGAGTGTCCATTAGGGCAAGATCAGATTTCTCATTGATGAGTGATGGGTGTCGATGGAGAAAGTATGGACAAAAGGTATCAAAGTTTAACCCCTACTCTCCCCGGGCCTACTATCGTTGCAATATGGGATTGAGAGCAACACCATGTCCGGTTCGTAAGCAGGTAGTTCAAAGGTGTTGTGTAGATAAGACAGTTTTCATCACAACATATGAGGGAAACCATAATCATTCACTTCCACCAGCAGCCAGGTTGACAGCAAGCACAACATCAGCAGCATTGAGTATGTTACTTTCTGGTTCAACCACTAGTTCACATGGAAGCACCACTTTCTCAAATGCAAACCTCTTCTCCTCCTCATCATCTTCTATTTCCTCTGCCTCCACTGGCTTGTCTGTTTTCGATTCATATGCATCATCACGTCCCACTATAACATTGGACTTAACCCAACCATCTAATAACTTCTTCAAATTCCAATTGCCTATTTCTTCAATAAACCACTACCAACCGTTTCCTCTTTCATTGCATGGTTACCCTCAACAGTCCGAGGGATTGTGTTTGTCTTCTAATGTTTCAACTATGAAACCCTCGGACTCAGAGAAAAACCTTGCCTTTATAGATGTTGTGTGTGAAGCTATAATCAAGGATCCGTCTATTAAGGCAGCATTAGATTCAGCACTTTCTTCACTCACTTGA 1071 0.4034 MVGKVALQKLVQVDERLYDKNTVGIGCSGLSLSLNTNSEELPMNNQDQPIPQLKLGWLETKVEEVKRENQILRSMLNQVTQHYTLLQNQFLVETMQKQHQQSSSKINKQIILEEDQASQLASCRKARVSIRARSDFSLMSDGCRWRKYGQKVSKFNPYSPRAYYRCNMGLRATPCPVRKQVVQRCCVDKTVFITTYEGNHNHSLPPAARLTASTTSAALSMLLSGSTTSSHGSTTFSNANLFSSSSSSISSASTGLSVFDSYASSRPTITLDLTQPSNNFFKFQLPISSINHYQPFPLSLHGYPQQSEGLCLSSNVSTMKPSDSEKNLAFIDVVCEAIIKDPSIKAALDSALSSLT 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00599 356 SUPERFAMILY WRKY DNA-binding domain 132 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo1g00599 356 SMART WRKY_cls 139 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g00599 356 Gene3D WRKY domain 123 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo1g00599 356 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 50 355 IPR044810 GO:0003700
Mepo1g00599 356 ProSiteProfiles WRKY domain profile. 134 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g00599 356 Pfam WRKY DNA -binding domain 141 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g00599 356 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00599 Mepo-Chr1 5680477 5683768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00599 115 275 WRKY Transcription Factor Family AT4G04450 56.522 1.10e-48 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo1g00599 WRKY 1.9e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00599 - - psat:127138760 362.073