Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00588 ATGGAAACATATGAACAAATTGATGCTCATCAGACCCAATCATCTTCATCTTCATCTTCTTCAATAGATAGTAACAACTACCCTTCATCACTGTGCCTCTCAAGTGTCTACAGAAATAGTAGCAGCAGCAGAAACAGAACAGATTTGAGCACTGACCTTAAACTTGGTCTTAGCATCTCTCCTTCTTCTCAATCTCAATTACCAAGGGAGGAAACATATGATTGGCCACCAATTAATAAGTCCATATTGAGAAGCACCTTGGCTGAGAAACAAAGACCTTCTTTATTTGTTAAAGTTTATATGGAAGGAATCCCAATTGGAAGAAAATTAAATCTGTTGGAACATCATAGCTATGATGGACTTATTAAAGCTCTTTGTCATATGTTTAGGACCACCATTCTTTGTCCCAACTCTCAACCACTTAATTCATGGAATTTTCATGTGCTAACATATGAAGATCAAGAAGGAGACTGGATGATGGTTGGAGATGTGCCTTGGGAGATGTTTTTGTCCAGTGTGAAGAGGCTGAAGATCACAAGAGCTAACAGCTGCTAG 555 0.3856 METYEQIDAHQTQSSSSSSSSIDSNNYPSSLCLSSVYRNSSSSRNRTDLSTDLKLGLSISPSSQSQLPREETYDWPPINKSILRSTLAEKQRPSLFVKVYMEGIPIGRKLNLLEHHSYDGLIKALCHMFRTTILCPNSQPLNSWNFHVLTYEDQEGDWMMVGDVPWEMFLSSVKRLKITRANSC 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00588 184 MobiDBLite consensus disorder prediction 1 26 - -
Mepo1g00588 184 SUPERFAMILY CAD & PB1 domains 85 178 - -
Mepo1g00588 184 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 50 182 IPR003311 GO:0005634|GO:0006355
Mepo1g00588 184 ProSiteProfiles PB1 domain profile. 94 183 IPR000270 GO:0005515
Mepo1g00588 184 Gene3D - 88 184 - -
Mepo1g00588 184 Pfam AUX/IAA family 90 181 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00588 Mepo-Chr1 5595936 5597340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00588 97 178 B3 DNA Binding Superfamily AT2G46530 39.024 3.81e-11 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Mepo1g00588 AUX_IAA 3.9e-30 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00588 K14484 - gmx:100818083 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00588 1 5595936 5597340 Mepo1g00588 1 5595936 5597340 ECH