Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00568 ATGGGTTTCTACACTCAACAATCCATCTCCAATTTAACTATAAGCCAAGCCATATATGAAGCTGCTCTAATCATTGCAGTTCTTAGATGGATCATATGCTTAGTTTTCAAAATAATCAAACATACAAGAACAAAACCAGAAGAAAAACAGCAGCAATACTCTTCTTGTTGTCAAATGTTACCGTTGACAAGTTTCGGAGAAATCAAGGAAAGACATCCAGAAACAGAAGAAACATGTGCTGTTTGTTTGAACAAGCTGAAAATGGAAGATGAAGTTAGAGAATTGATGAACTGTGATCATGTGTTTCATAAGGAATGCATAGATAAGTGGTTGGAACATGGTCATGAGAATGAAAATCATAACCAAACTTGTCCACTTTGTAGAGCTCCTTTGATTAATTCTTATTCACTTTCATCTGAAATTTCAAGCTGTGGATTTTCTCCTCCTCAACCTAGTTGGGCTGTTGAGAGACTTCTTTATCTCTTTGGTGATGATCTCTTGCCTTGTTAA 510 0.3588 MGFYTQQSISNLTISQAIYEAALIIAVLRWIICLVFKIIKHTRTKPEEKQQQYSSCCQMLPLTSFGEIKERHPETEETCAVCLNKLKMEDEVRELMNCDHVFHKECIDKWLEHGHENENHNQTCPLCRAPLINSYSLSSEISSCGFSPPQPSWAVERLLYLFGDDLLPC 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00568 169 PANTHER RING ZINC FINGER PROTEIN-RELATED 24 166 - -
Mepo1g00568 169 ProSiteProfiles Zinc finger RING-type profile. 79 128 IPR001841 -
Mepo1g00568 169 Pfam Ring finger domain 78 128 IPR001841 -
Mepo1g00568 169 SMART ring_2 79 127 IPR001841 -
Mepo1g00568 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 142 IPR013083 -
Mepo1g00568 169 SUPERFAMILY RING/U-box 72 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00568 Mepo-Chr1 5471838 5472695 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00568 1 168 C3H Transcription Factor Family AT3G43430 41.808 1.08e-41 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00568 K16281 - gmx:100306203 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00568 1 5471838 5472695 Mepo1g00568 1 5471838 5472695 ECH