Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo1g00568 | ATGGGTTTCTACACTCAACAATCCATCTCCAATTTAACTATAAGCCAAGCCATATATGAAGCTGCTCTAATCATTGCAGTTCTTAGATGGATCATATGCTTAGTTTTCAAAATAATCAAACATACAAGAACAAAACCAGAAGAAAAACAGCAGCAATACTCTTCTTGTTGTCAAATGTTACCGTTGACAAGTTTCGGAGAAATCAAGGAAAGACATCCAGAAACAGAAGAAACATGTGCTGTTTGTTTGAACAAGCTGAAAATGGAAGATGAAGTTAGAGAATTGATGAACTGTGATCATGTGTTTCATAAGGAATGCATAGATAAGTGGTTGGAACATGGTCATGAGAATGAAAATCATAACCAAACTTGTCCACTTTGTAGAGCTCCTTTGATTAATTCTTATTCACTTTCATCTGAAATTTCAAGCTGTGGATTTTCTCCTCCTCAACCTAGTTGGGCTGTTGAGAGACTTCTTTATCTCTTTGGTGATGATCTCTTGCCTTGTTAA | 510 | 0.3588 | MGFYTQQSISNLTISQAIYEAALIIAVLRWIICLVFKIIKHTRTKPEEKQQQYSSCCQMLPLTSFGEIKERHPETEETCAVCLNKLKMEDEVRELMNCDHVFHKECIDKWLEHGHENENHNQTCPLCRAPLINSYSLSSEISSCGFSPPQPSWAVERLLYLFGDDLLPC | 169 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo1g00568 | 169 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 24 | 166 | - | - | |
Mepo1g00568 | 169 | ProSiteProfiles | Zinc finger RING-type profile. | 79 | 128 | IPR001841 | - | |
Mepo1g00568 | 169 | Pfam | Ring finger domain | 78 | 128 | IPR001841 | - | |
Mepo1g00568 | 169 | SMART | ring_2 | 79 | 127 | IPR001841 | - | |
Mepo1g00568 | 169 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 64 | 142 | IPR013083 | - | |
Mepo1g00568 | 169 | SUPERFAMILY | RING/U-box | 72 | 134 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo1g00568 | Mepo-Chr1 | 5471838 | 5472695 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo1g00568 | 1 | 168 | C3H Transcription Factor Family | AT3G43430 | 41.808 | 1.08e-41 | 135 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo1g00568 | K16281 | - | gmx:100306203 | 221.476 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mepo1g00568 | 1 | 5471838 | 5472695 | Mepo1g00568 | 1 | 5471838 | 5472695 | ECH |