Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00567 ATGGGTTTTTACACCGAACAATCCATCTCTATTTTAACAATAGGCCAAGCCATATACATTGCTGTTCTTAGATGGATCATATGCTTAGTTTTCAAAATAATCAAACATACAAGAACAAAACCAGAAGAAAAACAGCAGCAATACTCTTCTTGTTGTCAAATGTTACCGTTGACAAGTTTCGGAGAAATCAAGGAAAGACATCCAGAAACAGAAGAAACATGTGCTGTTTGTTTGAACAAGCTGAAAATGGAAGATGAAGTTAGAGAATTGATGAACTGTGATCATGTGTTTCATAAGGAATGCATAGATAAGTGGTTGGAACATGGTCATGAGAATGAAAATGATTACCAAACTTGTCCACTTTGTAGAGCTCCTTTGATTAATAGTTTTTGGGTTTCTCCTAGTCAACCTCATTGGGCTGTGGAAAGACTTCTTTATCTATGTGGTGATGATCTTTTGCCTTGTTAA 468 0.3568 MGFYTEQSISILTIGQAIYIAVLRWIICLVFKIIKHTRTKPEEKQQQYSSCCQMLPLTSFGEIKERHPETEETCAVCLNKLKMEDEVRELMNCDHVFHKECIDKWLEHGHENENDYQTCPLCRAPLINSFWVSPSQPHWAVERLLYLCGDDLLPC 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00567 155 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 131 IPR013083 -
Mepo1g00567 155 Pfam Ring finger domain 73 123 IPR001841 -
Mepo1g00567 155 ProSiteProfiles Zinc finger RING-type profile. 74 123 IPR001841 -
Mepo1g00567 155 SMART ring_2 74 122 IPR001841 -
Mepo1g00567 155 PANTHER RING ZINC FINGER PROTEIN-RELATED 23 128 - -
Mepo1g00567 155 SUPERFAMILY RING/U-box 67 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00567 Mepo-Chr1 5463809 5464276 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00567 1 152 C3H Transcription Factor Family AT5G20885 41.954 1.93e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00567 K16281 - gmx:100306203 202.986